Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: copia-type polyprotein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene34896 SustainPine v1.1 436
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.62468e-22
C-terminus
sp_v1.1_unigene34938 SustainPine v1.1 387
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 6.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.17664e-30
Internal
sp_v1.1_unigene38174 SustainPine v1.1 528
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.89783e-35
Internal
sp_v1.1_unigene38409 SustainPine v1.1 486
• AutoFact: similar to copia-type polyprotein, putative 9.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.87112e-16
Putative C-terminus
sp_v1.1_unigene40812 SustainPine v1.1 604
• AutoFact: Copia-type polyprotein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.27457e-40
Internal
sp_v1.1_unigene41857 SustainPine v1.1 507
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Fragaria x ananassa RepID=C6GFP7_FRAAN 5.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 8.30273e-19
Putative N-terminus
sp_v1.1_unigene44282 SustainPine v1.1 336
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 8.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.54384e-22
Internal
sp_v1.1_unigene45491 SustainPine v1.1 373
• AutoFact: T26F17.17 n=1 Tax=Arabidopsis thaliana RepID=Q9SFE1_ARATH 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.51331e-28
Internal
sp_v1.1_unigene45781 SustainPine v1.1 446
• AutoFact: Copia-type polyprotein, putative n=3 Tax=Arabidopsis thaliana RepID=Q9C739_ARATH 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 3.6654e-39
Internal
sp_v1.1_unigene49061 SustainPine v1.1 406
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.63742e-21
Internal
sp_v1.1_unigene50300 SustainPine v1.1 495
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.3534e-34
Internal
sp_v1.1_unigene50865 SustainPine v1.1 304
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 9.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 9.41889e-20
Internal
sp_v1.1_unigene52744 SustainPine v1.1 269
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 4.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 7.75737e-22
Internal
sp_v1.1_unigene53315 SustainPine v1.1 338
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 3.11074e-23
Internal
sp_v1.1_unigene56814 SustainPine v1.1 237
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: copia-type polyprotein 1.91003e-12
Internal
sp_v1.1_unigene57311 SustainPine v1.1 466
• AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 9.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.52053e-12
N-terminus
sp_v1.1_unigene57859 SustainPine v1.1 486
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.98657e-26
Internal
sp_v1.1_unigene58097 SustainPine v1.1 511
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 6.47011e-31
Internal
sp_v1.1_unigene58138 SustainPine v1.1 679
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 4.31074e-37
Internal
sp_v1.1_unigene58231 SustainPine v1.1 238
• AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 9.48923e-14
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain