Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: rRNA binding

Term: GO:0019843  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene12225 SustainPine v1.1 530
AutoFact: 40S ribosomal protein S9 n=2 Tax=Agaricomycetes incertae sedis RepID=B8P5V0_POSPM 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s9 0.0
Putative C-terminus
sp_v1.1_unigene14452 SustainPine v1.1 1145
AutoFact: 50S ribosomal protein L10, putative n=1 Tax=Ricinus communis RepID=B9RY97_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene14500 SustainPine v1.1 1159
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s6 family protein 0.0
Complete
sp_v1.1_unigene14841 SustainPine v1.1 1501
AutoFact: 60S ribosomal protein L11-1 n=56 Tax=Embryophyta RepID=RL111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 0.0
Complete
sp_v1.1_unigene14949 SustainPine v1.1 1049
AutoFact: 50S ribosomal protein CL25, chloroplast precursor, putative 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.82147e-40
Complete
sp_v1.1_unigene14992 SustainPine v1.1 785
AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15047 SustainPine v1.1 1141
AutoFact: 40S ribosomal protein S9-2 n=1 Tax=Arabidopsis thaliana RepID=RS92_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
sp_v1.1_unigene15107 SustainPine v1.1 1307
AutoFact: pco113533; LOC100284304; K02940 large subunit ribosomal protein L9e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l9 0.0
Complete
sp_v1.1_unigene15298 SustainPine v1.1 1174
AutoFact: similar to EMB2394 (EMBRYO DEFECTIVE 2394); structural constituent of ribosome; K02933 large subunit ribosomal protein L6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l6 0.0
Complete
sp_v1.1_unigene15545 SustainPine v1.1 1164
AutoFact: 40S ribosomal protein S11-1 n=12 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
sp_v1.1_unigene15716 SustainPine v1.1 2023
AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 0.0
FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15860 SustainPine v1.1 1305
AutoFact: 60S ribosomal protein L23A n=3 Tax=Magnoliophyta RepID=RL23A_FRIAG 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: x chain localization of the large subunit ribosomal proteins into a a cryo-em map of triticum aestivum translating 80s ribosome 0.0
Complete
sp_v1.1_unigene16008 SustainPine v1.1 1064
AutoFact: 60S ribosomal protein L23A n=3 Tax=Magnoliophyta RepID=RL23A_FRIAG 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein 0.0
Complete
sp_v1.1_unigene16384 SustainPine v1.1 806
AutoFact: 40S ribosomal protein S11-1 n=12 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
sp_v1.1_unigene16534 SustainPine v1.1 964
AutoFact: 30S ribosomal protein S17, putative n=1 Tax=Ricinus communis RepID=B9RQK5_RICCO 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein 0.0
Complete
sp_v1.1_unigene16559 SustainPine v1.1 912
AutoFact: 30S ribosomal protein S9, chloroplastic n=6 Tax=Arabidopsis RepID=RR9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s9 0.0
Complete
sp_v1.1_unigene16603 SustainPine v1.1 1244
AutoFact: 50S ribosomal protein L6, putative; K02933 large subunit ribosomal protein L6 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l6 5.60519e-45
Complete
sp_v1.1_unigene16634 SustainPine v1.1 1053
AutoFact: ribosomal protein S6 family protein [Arabidopsis thaliana] dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67031.1| unknown [Arabidopsis thaliana] dbj|BAC42712.1| unknown protein [Arabidopsis thaliana] gb|AAO50729.1| unknown protein [ 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s6 family protein 0.0
Complete
sp_v1.1_unigene16806 SustainPine v1.1 1570
AutoFact: 40S ribosomal protein S8 n=4 Tax=Picea sitchensis RepID=A9NNT7_PICSI 0.0
FL-Next: sp=40S ribosomal protein S8; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s8 0.0
Complete
sp_v1.1_unigene18583 SustainPine v1.1 1161
AutoFact: pco113533; LOC100284304; K02940 large subunit ribosomal protein L9e 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l9 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain