Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: spliceosomal complex

Term: GO:0005681  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene11720 SustainPine v1.1 1742
AutoFact: U4/U6 small nuclear ribonucleoprotein Prp4, putative (EC:2.3.1.48); K12662 U4/U6 small nuclear ribonucleoprotein PRP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene12141 SustainPine v1.1 506
AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: adapter protein ath-55 0.0
Internal
sp_v1.1_unigene15115 SustainPine v1.1 843
AutoFact: Thioredoxin-like protein 4A n=45 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-like 4a 0.0
Complete
sp_v1.1_unigene16206 SustainPine v1.1 905
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIU4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene16394 SustainPine v1.1 1520
AutoFact: pre-mRNA-splicing factor prp45; K06063 SNW domain-containing protein 1 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear protein 0.0
N-terminus
sp_v1.1_unigene16695 SustainPine v1.1 1388
AutoFact: Pre-mRNA-processing-splicing factor, putative n=2 Tax=Magnoliophyta RepID=B9RV85_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene17131 SustainPine v1.1 737
AutoFact: Barley B recombinant n=1 Tax=Hordeum vulgare RepID=Q8GUC3_HORVU 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gaga binding family expressed 0.0
C-terminus
sp_v1.1_unigene17191 SustainPine v1.1 1075
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8J4_PHYPA 3.00018e-42
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nuclear protein 0.0
C-terminus
sp_v1.1_unigene17225 SustainPine v1.1 1244
AutoFact: Pre-mRNA-splicing factor cwc15, putative; K12863 protein CWC15 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor cwc15 0.0
Complete
sp_v1.1_unigene19251 SustainPine v1.1 625
AutoFact: Nuclear protein skip, putative n=1 Tax=Ricinus communis RepID=B9SX87_RICCO 3.0e-37
FL-Next: tr=Nuclear protein skip, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nuclear protein 1.85086e-37
C-terminus
sp_v1.1_unigene19276 SustainPine v1.1 592
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain