Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: protein-chromophore linkage

Term: GO:0018298  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene11454 SustainPine v1.1 458
AutoFact: DNA photolyase, putative n=1 Tax=Ricinus communis RepID=B9SPQ6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cryptochrome dash 0.0
Internal
sp_v1.1_unigene11533 SustainPine v1.1 655
AutoFact: Phytochrome n=1 Tax=Picea abies RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
sp_v1.1_unigene14933 SustainPine v1.1 1098
AutoFact: Type 1 chlorophyll a /b-binding protein n=1 Tax=Pinus sylvestris RepID=Q02069_PINSY 0.0
FL-Next: tr=Type 1 chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Blast2go: light-harvesting complex i protein lhca1 0.0
Complete
sp_v1.1_unigene15142 SustainPine v1.1 931
AutoFact: Type 1 chlorophyll a /b-binding protein n=1 Tax=Pinus sylvestris RepID=Q02069_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: light-harvesting complex i protein lhca1 0.0
Complete
sp_v1.1_unigene15148 SustainPine v1.1 1214
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=36 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
FL-Next: tr=Chlorophyll a/b binding protein; Pinus contorta (Shore pine) (Lodgepole pine). 0.0
Blast2go: chloroplast light harvesting chlorophyll a b binding protein 0.0
Complete
sp_v1.1_unigene15541 SustainPine v1.1 1438
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=10 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: chlorophyll a b-binding protein 0.0
Complete
sp_v1.1_unigene15635 SustainPine v1.1 1058
AutoFact: Chlorophyll a-b binding protein type I, chloroplastic n=10 Tax=Pinaceae RepID=CB21_PINTH 0.0
FL-Next: tr=Chlorophyll a/b-binding protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: light-harvesting complex ii protein lhcb2 0.0
Complete
sp_v1.1_unigene15688 SustainPine v1.1 1078
AutoFact: Chlorophyll a-b binding protein type 2 member 1A, chloroplastic n=36 Tax=Spermatophyta RepID=CB2A_PINSY 0.0
FL-Next: sp=Chlorophyll a-b binding protein type 2 member 1A, chloroplastic; Pinus sylvestris (Scots pine). 0.0
Blast2go: chlorophyll a b-binding protein 0.0
Complete
sp_v1.1_unigene15804 SustainPine v1.1 701
AutoFact: Phytochrome n=1 Tax=Picea abies RepID=PHY_PICAB 3.0e-26
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome c 6.12905e-26
C-terminus
sp_v1.1_unigene16288 SustainPine v1.1 1098
AutoFact: Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I n=5 Tax=Pinaceae RepID=Q07489_PINSY 0.0
FL-Next: tr=Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I; Pinus sylvestris (Scots pine). 0.0
Blast2go: chlorophyll a-b binding protein 4 precursor homolog 0.0
Complete
sp_v1.1_unigene16473 SustainPine v1.1 1292
AutoFact: Phytochrome N (Fragment) n=6 Tax=Pinus RepID=A7Y6H3_PINSY 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome n 0.0
Internal
sp_v1.1_unigene16540 SustainPine v1.1 1468
AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 0.0
FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Blast2go: type iii chlorophyll a b-binding protein 0.0
Complete
sp_v1.1_unigene18450 SustainPine v1.1 1560
AutoFact: Type II chlorophyll a /b-binding protein n=3 Tax=Pinaceae RepID=Q02070_PINSY 0.0
FL-Next: tr=Putative chlorophyll A-B binding protein of LHCI type II; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: chlorophyll a-b binding protein 0.0
Complete
sp_v1.1_unigene18775 SustainPine v1.1 257
AutoFact: Chlorophyll a/b-binding protein n=1 Tax=Picea glauca RepID=Q9LKZ0_PICGL 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chlorophyll a b-binding protein 2.34643e-26
N-terminus
sp_v1.1_unigene19889 SustainPine v1.1 522
AutoFact: Phytochrome (Fragment) n=1 Tax=Pseudotsuga menziesii RepID=Q40917_PSEMZ 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome c 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain