Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleosome

Term: GO:0000786  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene10791 SustainPine v1.1 956
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b like protein 1.28541e-41
Putative Complete
sp_v1.1_unigene14838 SustainPine v1.1 819
AutoFact: Histone H3 n=2 Tax=Ostreococcus RepID=A4RXW9_OSTLU 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
Complete
sp_v1.1_unigene14890 SustainPine v1.1 918
AutoFact: PREDICTED: similar to histone 1, H2ai (predicted) n=1 Tax=Canis lupus familiaris RepID=UPI00005A5824 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
Complete
sp_v1.1_unigene14924 SustainPine v1.1 1557
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 3.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 9.70796e-28
Complete
sp_v1.1_unigene15095 SustainPine v1.1 1027
AutoFact: Histone H2B.6 n=62 Tax=Spermatophyta RepID=H2B6_ARATH 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 1.4013e-45
Complete
sp_v1.1_unigene15244 SustainPine v1.1 1068
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 4.00001e-41
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.18382e-41
Complete
sp_v1.1_unigene15251 SustainPine v1.1 1294
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-35
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1-like protein 2.19357e-35
Complete
sp_v1.1_unigene15342 SustainPine v1.1 1229
AutoFact: Histone-like protein (Fragment) n=12 Tax=Fritillaria liliacea RepID=Q93WC3_FRILI 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 1.11977e-33
Complete
sp_v1.1_unigene15432 SustainPine v1.1 1100
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 9.80909e-45
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 2.66247e-44
Complete
sp_v1.1_unigene15448 SustainPine v1.1 931
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 2.35158e-24
Complete
sp_v1.1_unigene15899 SustainPine v1.1 1129
AutoFact: Histone H2AX n=9 Tax=Spermatophyta RepID=H2AX_PICAB 2.0e-32
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 2.21147e-33
Complete
sp_v1.1_unigene15969 SustainPine v1.1 1359
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Complete
sp_v1.1_unigene16491 SustainPine v1.1 830
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.91303e-24
Complete
sp_v1.1_unigene16493 SustainPine v1.1 1052
AutoFact: Histone H2A n=5 Tax=Pinaceae RepID=A9NK06_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 4.2363e-36
Complete
sp_v1.1_unigene16513 SustainPine v1.1 1111
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 3.92364e-43
Complete
sp_v1.1_unigene16789 SustainPine v1.1 953
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 8.34719e-25
Complete
sp_v1.1_unigene17027 SustainPine v1.1 709
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 2.91299e-38
Complete
sp_v1.1_unigene17284 SustainPine v1.1 553
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 2.08532e-38
Complete
sp_v1.1_unigene17654 SustainPine v1.1 933
AutoFact: Histone H2A n=5 Tax=Pinaceae RepID=A9NK06_PICSI 1.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.26875e-27
Putative Complete
sp_v1.1_unigene18562 SustainPine v1.1 1033
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 3.0e-30
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 2.6119e-30
Misassembled

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain