Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: rna binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene962 SustainPine v1.1 914
AutoFact: RNA binding / tRNA (guanine-N2-)-methyltransferase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Putative Complete
sp_v1.1_unigene2990 SustainPine v1.1 922
AutoFact: RNA binding protein n=3 Tax=Andropogoneae RepID=B6U6Y1_MAIZE 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 3.21666e-34
Complete
sp_v1.1_unigene10719 SustainPine v1.1 1368
AutoFact: PREDICTED: similar to RNA binding / translation initiation factor n=1 Tax=Vitis vinifera RepID=UPI000198501E 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene14991 SustainPine v1.1 1058
AutoFact: glycine-rich RNA-binding protein, putative 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene15031 SustainPine v1.1 1093
AutoFact: glycine-rich RNA-binding protein, putative 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene15383 SustainPine v1.1 1061
AutoFact: RNA binding protein 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 1.4013e-44
Complete
sp_v1.1_unigene16599 SustainPine v1.1 843
AutoFact: RRM_1 domain containing protein 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
sp_v1.1_unigene16925 SustainPine v1.1 1378
AutoFact: RNA binding protein-like protein n=1 Tax=Solanum tuberosum RepID=Q2VCH8_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene35294 SustainPine v1.1 1199
AutoFact: RNA binding protein n=3 Tax=Andropogoneae RepID=B6TN55_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Putative C-terminus
sp_v1.1_unigene35969 SustainPine v1.1 373
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 9.2615e-15
N-terminus
sp_v1.1_unigene40610 SustainPine v1.1 426
AutoFact: Zinc finger CCCH domain-containing protein 42 n=1 Tax=Arabidopsis thaliana RepID=C3H42_ARATH 1.0e-27
FL-Next: sp=Zinc finger CCCH domain-containing protein 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna binding protein 2.75596e-27
N-terminus
sp_v1.1_unigene41118 SustainPine v1.1 402
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna binding protein 0.0
Internal
sp_v1.1_unigene58249 SustainPine v1.1 933
AutoFact: binding / protein binding 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rna binding protein 0.0
C-terminus
sp_v1.1_unigene60188 SustainPine v1.1 261
AutoFact: RNA binding protein n=2 Tax=Zea mays RepID=B6T7I1_MAIZE 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 1.13133e-28
Internal
sp_v1.1_unigene61761 SustainPine v1.1 331
AutoFact: binding / protein binding 3.0e-27
FL-Next: tr=Os05g0147200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna binding protein 7.48255e-33
N-terminus
sp_v1.1_unigene76148 SustainPine v1.1 807
AutoFact: Regulator of nonsense transcripts, putative n=1 Tax=Ricinus communis RepID=B9SD55_RICCO 0.0
FL-Next: tr=Regulator of nonsense transcripts, putative; Ricinus communis (Castor bean). 0.0
Blast2go: rna binding protein 0.0
N-terminus
sp_v1.1_unigene80137 SustainPine v1.1 459
AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 2.64869e-22
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain