Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: retrotransposon unclassified

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene67691 SustainPine v1.1 340
AutoFact: CCHC-type integrase n=1 Tax=Populus trichocarpa RepID=Q0ZCC5_POPTR 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.4032e-19
Internal
sp_v1.1_unigene68641 SustainPine v1.1 323
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 5.76381e-18
Internal
sp_v1.1_unigene68791 SustainPine v1.1 484
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.12056e-19
Internal
sp_v1.1_unigene69295 SustainPine v1.1 449
AutoFact: Polyprotein n=1 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 4.0e-27
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 6.93466e-27
C-terminus
sp_v1.1_unigene69350 SustainPine v1.1 356
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 1.51771e-25
Putative C-terminus
sp_v1.1_unigene71369 SustainPine v1.1 384
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 5.9189e-30
N-terminus
sp_v1.1_unigene71480 SustainPine v1.1 419
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 3.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 6.18234e-25
Putative C-terminus
sp_v1.1_unigene71566 SustainPine v1.1 403
AutoFact: Os07g0434200 protein (Fragment) n=2 Tax=Oryza sativa RepID=Q0D6W3_ORYSJ 1.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 2.39705e-14
Internal
sp_v1.1_unigene71855 SustainPine v1.1 280
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q5W683_ORYSJ 9.0e-17
FL-Next: tr=Putative polyprotein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 1.65891e-16
Internal
sp_v1.1_unigene71986 SustainPine v1.1 397
AutoFact: Polyprotein n=1 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 7.0e-26
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Blast2go: retrotransposon unclassified 1.27008e-25
Internal
sp_v1.1_unigene72443 SustainPine v1.1 416
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QVH8_ORYSJ 4.0e-26
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 4.65322e-27
Internal
sp_v1.1_unigene72656 SustainPine v1.1 429
AutoFact: OSJNBa0091D06.8 protein n=1 Tax=Oryza sativa RepID=Q7XU13_ORYSA 1.0e-20
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 1.24769e-21
Internal
sp_v1.1_unigene72858 SustainPine v1.1 408
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10I89_ORYSJ 5.0e-12
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 5.56827e-12
Putative Complete
sp_v1.1_unigene72994 SustainPine v1.1 393
AutoFact: B1248C03.3 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7FAL2_ORYSJ 3.0e-21
FL-Next: tr=B1248C03.3 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 6.69798e-21
Internal
sp_v1.1_unigene73051 SustainPine v1.1 595
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 3.80586e-31
Internal
sp_v1.1_unigene73143 SustainPine v1.1 366
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.42215e-23
Putative N-terminus
sp_v1.1_unigene73242 SustainPine v1.1 429
AutoFact: Integrase, catalytic region; Ribonuclease H n=1 Tax=Medicago truncatula RepID=Q2HW89_MEDTR 2.0e-18
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 2.26236e-21
Internal
sp_v1.1_unigene73285 SustainPine v1.1 418
AutoFact: H0502G05.11 protein n=1 Tax=Oryza sativa RepID=Q01JF5_ORYSA 4.0e-19
FL-Next: tr=H0502G05.11 protein; Oryza sativa (Rice). 0.0
Blast2go: retrotransposon unclassified 8.18292e-19
Internal
sp_v1.1_unigene73381 SustainPine v1.1 455
AutoFact: Putative gag-pol polyprotein, identical [Solanum demissum] 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.04562e-26
Putative N-terminus
sp_v1.1_unigene73573 SustainPine v1.1 395
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10FX2_ORYSJ 9.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 4.64927e-14
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain