Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: ribosome biogenesis

Term: GO:0042254  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene10103 SustainPine v1.1 991
• AutoFact: ribosomal protein S16 family protein 8.99998e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s16 0.0
Complete
sp_v1.1_unigene12225 SustainPine v1.1 530
• AutoFact: 40S ribosomal protein S9 n=2 Tax=Agaricomycetes incertae sedis RepID=B8P5V0_POSPM 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 40s ribosomal protein s9 0.0
Putative C-terminus
sp_v1.1_unigene12283 SustainPine v1.1 989
• AutoFact: 60S ribosomal protein L27 n=2 Tax=Picea sitchensis RepID=A9NQ84_PICSI 0.0
• FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l27 0.0
Complete
sp_v1.1_unigene12599 SustainPine v1.1 158
• AutoFact: 60S ribosomal protein L7A n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0NHA4_AJECG 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cytosolic large ribosomal subunit protein l7a 3.5467e-13
Internal
sp_v1.1_unigene14452 SustainPine v1.1 1145
• AutoFact: 50S ribosomal protein L10, putative n=1 Tax=Ricinus communis RepID=B9RY97_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene14682 SustainPine v1.1 1091
• AutoFact: ribosomal protein L30 family protein; K02907 large subunit ribosomal protein L30 4.0e-29
• FL-Next: tr=Ribosomal protein L30 family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: structural constituent of ribosome 1.83063e-29
Complete
sp_v1.1_unigene14799 SustainPine v1.1 1605
• AutoFact: ribosomal protein L5, putative; K02932 large subunit ribosomal protein L5e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein 0.0
Complete
sp_v1.1_unigene14862 SustainPine v1.1 1505
• AutoFact: 60S acidic ribosomal protein P0 (RPP0A); K02941 large subunit ribosomal protein LP0 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s acidic ribosomal protein p0 0.0
Complete
sp_v1.1_unigene14992 SustainPine v1.1 785
• AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 3.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15065 SustainPine v1.1 1825
• AutoFact: [J] COG2007 Ribosomal protein S8E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s8e family protein 0.0
Complete
sp_v1.1_unigene15364 SustainPine v1.1 1050
• AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein 0.0
Complete
sp_v1.1_unigene15578 SustainPine v1.1 1032
• AutoFact: 60S ribosomal protein L38, putative n=1 Tax=Ricinus communis RepID=B9RM38_RICCO 7.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l38 4.0252e-31
Complete
sp_v1.1_unigene15593 SustainPine v1.1 964
• AutoFact: 40S ribosomal protein S27-2 n=31 Tax=Embryophyta RepID=RS272_ARATH 5.0e-31
• FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein s27 3.18475e-33
Complete
sp_v1.1_unigene15837 SustainPine v1.1 1078
• AutoFact: 60S ribosomal protein L35a-1 n=11 Tax=rosids RepID=R35A1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l35a 0.0
Complete
sp_v1.1_unigene16159 SustainPine v1.1 881
• AutoFact: 60S ribosomal protein L35a-1 n=11 Tax=rosids RepID=R35A1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l35a 0.0
Complete
sp_v1.1_unigene16233 SustainPine v1.1 2029
• AutoFact: 60S ribosomal protein L10, mitochondrial, putative 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene16258 SustainPine v1.1 1231
• AutoFact: 60S ribosomal protein L7a; K02936 large subunit ribosomal protein L7Ae 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l7a 0.0
Complete
sp_v1.1_unigene16306 SustainPine v1.1 815
• AutoFact: 30S ribosomal protein S16 n=1 Tax=Solanum lycopersicum RepID=B3IWG3_SOLLC 6.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 30s ribosomal protein s16 6.16571e-44
Complete
sp_v1.1_unigene16646 SustainPine v1.1 928
• AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene16853 SustainPine v1.1 1048
• AutoFact: Ribosomal protein S27 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SLV7_PHYPA 8.0e-34
• FL-Next: sp=Ribosomal protein S27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.60385e-35
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain