Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-directed RNA polymerase.

Term: EC:2.7.7.6  Help

Source: EC from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene10042 SustainPine v1.1 1114
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase iv second largest subunit 0.0
Complete
sp_v1.1_unigene10591 SustainPine v1.1 821
• AutoFact: RNA polymerase sigma factor rpoD, putative 2.00386e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.05097e-43
C-terminus
sp_v1.1_unigene10715 SustainPine v1.1 941
• AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7UBN7_VITVI 4.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerase alpha subunit 9.07081e-32
C-terminus
sp_v1.1_unigene11735 SustainPine v1.1 682
• AutoFact: DNA-directed RNA polymerase n=2 Tax=rosids RepID=B9SXC0_RICCO 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase ii largest 0.0
N-terminus
sp_v1.1_unigene12238 SustainPine v1.1 242
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 4.0e-28
• FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
• Blast2go: rna polymerase iv 7.12484e-28
Internal
sp_v1.1_unigene13814 SustainPine v1.1 444
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8T979_SELML 8.99634e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.77124e-42
C-terminus
sp_v1.1_unigene14541 SustainPine v1.1 840
• AutoFact: DNA-directed RNA polymerase III subunit F, putative; K03025 DNA-directed RNA polymerase III subunit C34 [EC:2.7.7.6] 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene15170 SustainPine v1.1 1402
• AutoFact: DNA-directed RNA polymerase; K03014 DNA-directed RNA Polymerase II subunit F 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerase ii subunit-like protein 0.0
Complete
sp_v1.1_unigene15249 SustainPine v1.1 1196
• AutoFact: NRPB5; NRPB5; DNA binding / DNA-directed RNA polymerase; K03013 DNA-directed RNA polymerase II subunit E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15478 SustainPine v1.1 1115
• AutoFact: ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization; K03020 DNA-directed RNA polymerase III subunit C19 [EC:2.7.7.6] 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atrpc14 (rna polymerase 14 kda subunit) dna binding dna-directed rna polymerase protein dimerization 0.0
Complete
sp_v1.1_unigene15585 SustainPine v1.1 761
• AutoFact: ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT); DNA binding / DNA-directed RNA polymerase/ protein dimerization; K03020 DNA-directed RNA polymerase III subunit C19 [EC:2.7.7.6] 9.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: loc494863 protein 1.96182e-44
Putative Complete
sp_v1.1_unigene15690 SustainPine v1.1 636
• AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.44756e-24
Complete
sp_v1.1_unigene16110 SustainPine v1.1 658
• AutoFact: DNA-directed RNA polymerase II subunit Rpb10; K03007 DNA-directed RNA Polymerase II subunit L 7.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.19378e-34
Complete
sp_v1.1_unigene16413 SustainPine v1.1 799
• AutoFact: DNA-directed RNA polymerase II, putative; K03013 DNA-directed RNA polymerase II subunit E 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna polymerase ii and iii kda subunit 8.33197e-30
Putative Complete
sp_v1.1_unigene16945 SustainPine v1.1 982
• AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v1.1_unigene17794 SustainPine v1.1 1126
• AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase ii second largest subunit 0.0
Internal
sp_v1.1_unigene18367 SustainPine v1.1 1673
• AutoFact: DNA-directed RNA polymerase II subunit, putative; K03011 DNA-directed RNA polymerase II subunit C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v1.1_unigene18699 SustainPine v1.1 974
• AutoFact: DNA-directed RNA polymerase II subunit J n=3 Tax=Andropogoneae RepID=B4FJS1_MAIZE 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene19044 SustainPine v1.1 1652
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQW1_VITVI 0.0
• FL-Next: sp=DNA-directed RNA polymerase; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
• Blast2go: rna polymerase ii largest subunit 0.0
Putative C-terminus
sp_v1.1_unigene22591 SustainPine v1.1 964
• AutoFact: NRPB4; NRPB4; DNA-directed RNA polymerase; K03012 DNA-directed RNA polymerase II subunit D 0.0
• FL-Next: tr=RPB15.9; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: kda subunit of rna polymerase ii 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain