Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: single-stranded DNA binding

Term: GO:0003697  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene9385 SustainPine v1.1 1519
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDJ8_RICCO 0.0
FL-Next: sp=Flap endonuclease GEN-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
C-terminus
sp_v1.1_unigene11193 SustainPine v1.1 1346
AutoFact: DNA-repair protein UVH3, putative n=1 Tax=Ricinus communis RepID=B9RUC5_RICCO 0.0
FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-repair protein 0.0
Internal
sp_v1.1_unigene11283 SustainPine v1.1 496
AutoFact: ATP binding protein, putative 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 1.17408e-30
Internal
sp_v1.1_unigene13477 SustainPine v1.1 805
AutoFact: ATPase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mismatch repair endonuclease pms2 0.0
Putative Complete
sp_v1.1_unigene13643 SustainPine v1.1 762
AutoFact: single-strand binding protein 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: single-strand binding protein 5.31149e-34
C-terminus
sp_v1.1_unigene18614 SustainPine v1.1 1277
AutoFact: Single-stranded DNA-binding protein, mitochondrial precursor, putative; K03111 single-strand DNA-binding protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene28918 SustainPine v1.1 215
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S0M2_RICCO 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 2.22983e-16
Internal
sp_v1.1_unigene42318 SustainPine v1.1 659
AutoFact: Contains similarity to excision repair protein ERCC5 from Homo sapiens gi|1082359 and contains XPG N-terminal PF|00752 and XPG I-region PF|00867 domains [Arabidopsis thaliana] 1.0e-27
FL-Next: sp=Flap endonuclease GEN-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 1.25564e-29
N-terminus
sp_v1.1_unigene78900 SustainPine v1.1 1291
AutoFact: CCR4; cinnamoyl CoA reductase (EC:1.2.1.44) 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 0.0
Complete
sp_v1.1_unigene79428 SustainPine v1.1 385
AutoFact: cncr2, ccr2; cinnamoyl CoA reductase2 8.0e-39
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl- reductase 5.79047e-40
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain