Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: production of siRNA involved in RNA interference

Term: GO:0030422  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene9070 SustainPine v1.1 1228
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFX2_PHYPA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 6.54505e-31
Putative C-terminus
sp_v1.1_unigene9305 SustainPine v1.1 654
AutoFact: HEN1; HEN1 (HUA ENHANCER 1); RNA methyltransferase 2.0e-18
FL-Next: sp=Small RNA 2'-O-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: hen1 protein 1.61357e-21
C-terminus
sp_v1.1_unigene10715 SustainPine v1.1 941
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7UBN7_VITVI 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase alpha subunit 9.07081e-32
C-terminus
sp_v1.1_unigene10792 SustainPine v1.1 492
AutoFact: Argonaute/Zwille-like protein n=1 Tax=Picea glauca RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
Internal
sp_v1.1_unigene11491 SustainPine v1.1 1012
AutoFact: Argonaute/Zwille-like protein n=1 Tax=Picea glauca RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
N-terminus
sp_v1.1_unigene27270 SustainPine v1.1 673
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 3.0e-36
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 5.4755e-36
Internal
sp_v1.1_unigene29826 SustainPine v1.1 641
AutoFact: HEN1; HEN1 (HUA ENHANCER 1); RNA methyltransferase 5.04467e-44
FL-Next: sp=Small RNA 2'-O-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: hen1 protein 0.0
Internal
sp_v1.1_unigene32319 SustainPine v1.1 496
AutoFact: DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9GM06_POPTR 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus monophylla. Plastid; Chloroplast. 0.0
Blast2go: rna polymerase iv subunit 3.10006e-39
Internal
sp_v1.1_unigene32928 SustainPine v1.1 434
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 2.0e-25
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna 4.34482e-25
N-terminus
sp_v1.1_unigene34119 SustainPine v1.1 853
AutoFact: Argonaute/Zwille-like protein n=1 Tax=Picea glauca RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
Internal
sp_v1.1_unigene34381 SustainPine v1.1 546
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 3.0e-18
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna 6.10822e-18
Internal
sp_v1.1_unigene36390 SustainPine v1.1 345
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase iv second largest subunit 2.69049e-43
N-terminus
sp_v1.1_unigene37293 SustainPine v1.1 526
AutoFact: Argonaute/Zwille-like protein n=1 Tax=Picea glauca RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: eukaryotic translation initiation factor 0.0
Internal
sp_v1.1_unigene39735 SustainPine v1.1 402
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Internal
sp_v1.1_unigene41757 SustainPine v1.1 418
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 1.0e-28
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 1.13309e-28
Internal
sp_v1.1_unigene53661 SustainPine v1.1 395
AutoFact: RNA-dependent RNA polymerase, putative 3.0e-19
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 2 3.9058e-21
Internal
sp_v1.1_unigene57870 SustainPine v1.1 474
AutoFact: RNA-dependent RNA polymerase 1 n=4 Tax=Arabidopsis RepID=Q8H1K9_ARATH 3.0e-40
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 1 5.68749e-40
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain