Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: transcription from plastid promoter

Term: GO:0042793  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene8758 SustainPine v1.1 742
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene11995 SustainPine v1.1 715
• AutoFact: PTAC12; PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12) 3.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ptac12 (plastid transcriptionally active12) 0.0
N-terminus
sp_v1.1_unigene29040 SustainPine v1.1 1025
• AutoFact: PTAC6; PTAC6 (PLASTID TRANSCRIPTIONALLY ACTIVE6) 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ptac6 (plastid transcriptionally active6) 0.0
C-terminus
sp_v1.1_unigene31785 SustainPine v1.1 511
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 3.0e-39
• FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.13684e-39
Putative N-terminus
sp_v1.1_unigene32666 SustainPine v1.1 875
• AutoFact: PTAC2; PTAC2 (PLASTID TRANSCRIPTIONALLY ACTIVE2) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene36640 SustainPine v1.1 272
• AutoFact: PTAC6; PTAC6 (PLASTID TRANSCRIPTIONALLY ACTIVE6) 5.0e-29
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: ptac6 (plastid transcriptionally active6) 2.92731e-29
Internal
sp_v1.1_unigene37031 SustainPine v1.1 582
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene41238 SustainPine v1.1 413
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R8M0_RICCO 6.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.08441e-27
Internal
sp_v1.1_unigene60597 SustainPine v1.1 622
• AutoFact: PTAC12; PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12) 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.94751e-36
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain