Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-directed RNA polymerase IV complex

Term: GO:0000418  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene8092 SustainPine v1.1 1375
AutoFact: NRPB5; NRPB5; DNA binding / DNA-directed RNA polymerase; K03013 DNA-directed RNA polymerase II subunit E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene10715 SustainPine v1.1 941
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7UBN7_VITVI 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase alpha subunit 9.07081e-32
C-terminus
sp_v1.1_unigene15170 SustainPine v1.1 1402
AutoFact: DNA-directed RNA polymerase; K03014 DNA-directed RNA Polymerase II subunit F 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii subunit-like protein 0.0
Complete
sp_v1.1_unigene15249 SustainPine v1.1 1196
AutoFact: NRPB5; NRPB5; DNA binding / DNA-directed RNA polymerase; K03013 DNA-directed RNA polymerase II subunit E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15690 SustainPine v1.1 636
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.44756e-24
Complete
sp_v1.1_unigene16110 SustainPine v1.1 658
AutoFact: DNA-directed RNA polymerase II subunit Rpb10; K03007 DNA-directed RNA Polymerase II subunit L 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.19378e-34
Complete
sp_v1.1_unigene16413 SustainPine v1.1 799
AutoFact: DNA-directed RNA polymerase II, putative; K03013 DNA-directed RNA polymerase II subunit E 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii and iii kda subunit 8.33197e-30
Putative Complete
sp_v1.1_unigene18367 SustainPine v1.1 1673
AutoFact: DNA-directed RNA polymerase II subunit, putative; K03011 DNA-directed RNA polymerase II subunit C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v1.1_unigene18699 SustainPine v1.1 974
AutoFact: DNA-directed RNA polymerase II subunit J n=3 Tax=Andropogoneae RepID=B4FJS1_MAIZE 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene21038 SustainPine v1.1 723
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.63479e-23
Complete
sp_v1.1_unigene21428 SustainPine v1.1 1250
AutoFact: DNA-directed RNA polymerase; K03014 DNA-directed RNA Polymerase II subunit F 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii subunit 0.0
Complete
sp_v1.1_unigene23553 SustainPine v1.1 1225
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=C6SXF5_SOYBN 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
sp_v1.1_unigene24374 SustainPine v1.1 801
AutoFact: DNA-directed RNA polymerase subunit n=7 Tax=Embryophyta RepID=Q2QNM4_ORYSJ 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
sp_v1.1_unigene26045 SustainPine v1.1 742
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 2.04653e-24
Complete
sp_v1.1_unigene26596 SustainPine v1.1 738
AutoFact: DNA-directed RNA polymerase II subunit Rpb10; K03007 DNA-directed RNA Polymerase II subunit L 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.82365e-34
Complete
sp_v1.1_unigene27270 SustainPine v1.1 673
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 3.0e-36
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 5.4755e-36
Internal
sp_v1.1_unigene32319 SustainPine v1.1 496
AutoFact: DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9GM06_POPTR 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus monophylla. Plastid; Chloroplast. 0.0
Blast2go: rna polymerase iv subunit 3.10006e-39
Internal
sp_v1.1_unigene32928 SustainPine v1.1 434
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 2.0e-25
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna 4.34482e-25
N-terminus
sp_v1.1_unigene34381 SustainPine v1.1 546
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 3.0e-18
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna 6.10822e-18
Internal
sp_v1.1_unigene36390 SustainPine v1.1 345
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase iv second largest subunit 2.69049e-43
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain