Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-directed RNA polymerase IV complex

Term: GO:0000418  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene39735 SustainPine v1.1 402
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Internal
sp_v1.1_unigene41127 SustainPine v1.1 531
AutoFact: DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative; K03015 DNA-directed RNA polymerase II subunit G 2.0e-32
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: rna polymerase rpb7 n-terminal domain-containing protein 6.90148e-33
Putative C-terminus
sp_v1.1_unigene41334 SustainPine v1.1 389
AutoFact: IDP825; LOC100282883; K03011 DNA-directed RNA polymerase II subunit C 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 6.9427e-23
C-terminus
sp_v1.1_unigene41757 SustainPine v1.1 418
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 1.0e-28
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: rna polymerase iv second largest subunit 1.13309e-28
Internal
sp_v1.1_unigene58689 SustainPine v1.1 792
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.97271e-23
Complete
sp_v1.1_unigene58744 SustainPine v1.1 819
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 2.46396e-24
Complete
sp_v1.1_unigene58797 SustainPine v1.1 863
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 2.7176e-24
Complete
sp_v1.1_unigene59255 SustainPine v1.1 725
AutoFact: DNA-directed RNA polymerase II subunit Rpb10; K03007 DNA-directed RNA Polymerase II subunit L 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.69954e-34
Complete
sp_v1.1_unigene71518 SustainPine v1.1 383
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 6.58566e-21
Complete
sp_v1.1_unigene78013 SustainPine v1.1 324
AutoFact: DNA-directed RNA polymerase II subunit J n=3 Tax=Andropogoneae RepID=B4FJS1_MAIZE 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.53996e-28
Putative N-terminus
sp_v1.1_unigene80744 SustainPine v1.1 580
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=C6SXF5_SOYBN 6.0e-37
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 6.36506e-39
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain