Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA metabolic process

Term: GO:0016070  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene7194 SustainPine v1.1 523
AutoFact: ATP-dependent helicase, putative n=1 Tax=Ricinus communis RepID=B9SWF5_RICCO 1.0e-17
FL-Next: tr=ATP-dependent helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: defective in rna-directed dna methylation 1 2.21632e-17
Internal
sp_v1.1_unigene13213 SustainPine v1.1 415
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
Internal
sp_v1.1_unigene15270 SustainPine v1.1 973
AutoFact: Cyclic phosphodiesterase, putative n=1 Tax=Ricinus communis RepID=B9S8G6_RICCO 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene22342 SustainPine v1.1 1721
AutoFact: BPC6; ATBPC6; DNA binding / transcription factor 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gaga-binding transcriptional activator 0.0
Complete
sp_v1.1_unigene30830 SustainPine v1.1 382
AutoFact: DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=B9G500_ORYSJ 7.0e-19
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase iv largest subunit 1.36027e-18
Internal
sp_v1.1_unigene32048 SustainPine v1.1 313
AutoFact: pseudouridylate synthase/ transporter 8.0e-21
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: trna pseudouridine synthase b 6.42449e-21
C-terminus
sp_v1.1_unigene36490 SustainPine v1.1 726
AutoFact: Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE 0.0
FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna synthase 0.0
Internal
sp_v1.1_unigene41973 SustainPine v1.1 433
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTM6_RICCO 2.0e-36
FL-Next: tr=ATP-dependent RNA and DNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atp-dependent rna and dna 3.22053e-36
Internal
sp_v1.1_unigene42213 SustainPine v1.1 259
AutoFact: ATSUV3; ATSUV3; ATP-dependent RNA helicase 4.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: rna helicase like protein 9.2604e-23
Internal
sp_v1.1_unigene54746 SustainPine v1.1 611
AutoFact: ATP-dependent RNA and DNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RTM6_RICCO 0.0
FL-Next: tr=ATP-dependent RNA and DNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: rna helicase like protein 0.0
Putative N-terminus
sp_v1.1_unigene61306 SustainPine v1.1 544
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RC12_RICCO 1.0e-23
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase iv largest subunit 2.36627e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain