Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: mRNA processing

Term: GO:0006397  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene17697 SustainPine v1.1 1098
• AutoFact: Protein SSU72, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene19117 SustainPine v1.1 1866
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene19832 SustainPine v1.1 1694
• AutoFact: pre-mRNA cleavage complex II protein Clp1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna cleavage complex ii protein clp1 0.0
C-terminus
sp_v1.1_unigene23770 SustainPine v1.1 2058
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene24373 SustainPine v1.1 1097
• AutoFact: AFC1; AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase 5.00264e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
C-terminus
sp_v1.1_unigene28014 SustainPine v1.1 977
• AutoFact: Serine/threonine-protein kinase AFC2 n=3 Tax=Arabidopsis RepID=AFC2_ARATH 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
Complete
sp_v1.1_unigene28799 SustainPine v1.1 1755
• AutoFact: afc, putative (EC:2.7.12.1) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
Complete
sp_v1.1_unigene35093 SustainPine v1.1 1965
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene51299 SustainPine v1.1 2050
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=7 Tax=Poaceae RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
Complete
sp_v1.1_unigene55790 SustainPine v1.1 480
• AutoFact: pentatricopeptide repeat-containing protein, putative 1.0e-12
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing 1.10635e-12
N-terminus
sp_v1.1_unigene56852 SustainPine v1.1 377
• AutoFact: HCF152; HCF152 (HIGH CHLOROPHYLL FLUORESCENCE 152); mRNA binding 2.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 5.18953e-38
Internal
sp_v1.1_unigene59187 SustainPine v1.1 953
• AutoFact: AFC1; AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
C-terminus
sp_v1.1_unigene63219 SustainPine v1.1 398
• AutoFact: Serine/threonine-protein kinase AFC2 n=3 Tax=Arabidopsis RepID=AFC2_ARATH 1.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 1.4013e-45
Internal
sp_v1.1_unigene64225 SustainPine v1.1 1889
• AutoFact: Serine/threonine-protein kinase AFC2 n=3 Tax=Arabidopsis RepID=AFC2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
Complete
sp_v1.1_unigene75835 SustainPine v1.1 545
• AutoFact: AFC1; AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase 3.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 9.96772e-14
C-terminus
sp_v1.1_unigene79531 SustainPine v1.1 441
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 7.89244e-22
Putative Complete
sp_v1.1_unigene80685 SustainPine v1.1 826
• AutoFact: AFC1; AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
C-terminus
sp_v1.1_unigene80743 SustainPine v1.1 510
• AutoFact: Serine/threonine-protein kinase AFC2 n=3 Tax=Arabidopsis RepID=AFC2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
C-terminus
sp_v1.1_unigene84752 SustainPine v1.1 503
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain