Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: tRNA splicing, via endonucleolytic cleavage and ligation

Term: GO:0006388  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene5626 SustainPine v1.1 467
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: translation elongation factor ef-1 alpha 2.83414e-40
C-terminus
sp_v1.1_unigene13445 SustainPine v1.1 1487
• AutoFact: emb1067 (embryo defective 1067); tRNA 2'-phosphotransferase/ transferase, transferring phosphorus-containing groups 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: emb1067 (embryo defective 1067) trna 2 -phosphotransferase transferring phosphorus-containing groups 0.0
Putative Complete
sp_v1.1_unigene30264 SustainPine v1.1 750
• AutoFact: RNL; RNL (RNA LIGASE); 2',3'-cyclic-nucleotide 3'-phosphodiesterase/ RNA ligase (ATP)/ polynucleotide kinase 0.0
• FL-Next: tr=Os07g0191700 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: translation elongation factor ef-1 alpha 0.0
Internal
sp_v1.1_unigene31865 SustainPine v1.1 255
• AutoFact: RNL; RNL (RNA LIGASE); 2',3'-cyclic-nucleotide 3'-phosphodiesterase/ RNA ligase (ATP)/ polynucleotide kinase 2.0e-19
• FL-Next: tr=Putative uncharacterized protein Sb02g005590; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: translation elongation factor ef-1 alpha 9.88756e-25
Internal
sp_v1.1_unigene39107 SustainPine v1.1 484
• AutoFact: RNL; RNL (RNA LIGASE); 2',3'-cyclic-nucleotide 3'-phosphodiesterase/ RNA ligase (ATP)/ polynucleotide kinase 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: rnl (rna ligase) 2 -cyclic-nucleotide 3 -phosphodiesterase rna ligase polynucleotide kinase 3.87107e-37
Internal
sp_v1.1_unigene54443 SustainPine v1.1 296
• AutoFact: RNL; RNL (RNA LIGASE); 2',3'-cyclic-nucleotide 3'-phosphodiesterase/ RNA ligase (ATP)/ polynucleotide kinase 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: translation elongation factor ef-1 alpha 1.41965e-23
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain