Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-directed RNA polymerase II, core complex

Term: GO:0005665  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene26045 SustainPine v1.1 742
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 2.04653e-24
Complete
sp_v1.1_unigene26596 SustainPine v1.1 738
AutoFact: DNA-directed RNA polymerase II subunit Rpb10; K03007 DNA-directed RNA Polymerase II subunit L 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.82365e-34
Complete
sp_v1.1_unigene26645 SustainPine v1.1 985
AutoFact: NRPB4; NRPB4; DNA-directed RNA polymerase; K03012 DNA-directed RNA polymerase II subunit D 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
Complete
sp_v1.1_unigene27371 SustainPine v1.1 882
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v1.1_unigene28102 SustainPine v1.1 1866
AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nrpb1 (rna polymerase ii large subunit) dna binding dna-directed rna polymerase 0.0
Internal
sp_v1.1_unigene38514 SustainPine v1.1 758
AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
N-terminus
sp_v1.1_unigene41334 SustainPine v1.1 389
AutoFact: IDP825; LOC100282883; K03011 DNA-directed RNA polymerase II subunit C 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 6.9427e-23
C-terminus
sp_v1.1_unigene55506 SustainPine v1.1 335
AutoFact: DNA-directed RNA polymerase n=2 Tax=rosids RepID=B9SXC0_RICCO 3.0e-24
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 4.94261e-24
Internal
sp_v1.1_unigene58689 SustainPine v1.1 792
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.97271e-23
Complete
sp_v1.1_unigene58744 SustainPine v1.1 819
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 2.46396e-24
Complete
sp_v1.1_unigene58797 SustainPine v1.1 863
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 2.7176e-24
Complete
sp_v1.1_unigene59255 SustainPine v1.1 725
AutoFact: DNA-directed RNA polymerase II subunit Rpb10; K03007 DNA-directed RNA Polymerase II subunit L 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.69954e-34
Complete
sp_v1.1_unigene60316 SustainPine v1.1 895
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v1.1_unigene71518 SustainPine v1.1 383
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 6.58566e-21
Complete
sp_v1.1_unigene75960 SustainPine v1.1 412
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.40363e-31
C-terminus
sp_v1.1_unigene78013 SustainPine v1.1 324
AutoFact: DNA-directed RNA polymerase II subunit J n=3 Tax=Andropogoneae RepID=B4FJS1_MAIZE 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.53996e-28
Putative N-terminus
sp_v1.1_unigene79427 SustainPine v1.1 904
AutoFact: NRPB4; NRPB4; DNA-directed RNA polymerase; K03012 DNA-directed RNA polymerase II subunit D 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
Complete
sp_v1.1_unigene79542 SustainPine v1.1 607
AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 1.0e-29
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 3.21083e-31
Internal
sp_v1.1_unigene80744 SustainPine v1.1 580
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=C6SXF5_SOYBN 6.0e-37
FL-Next: sp=DNA-directed RNA polymerase subunit; Vitis vinifera (Grape). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 6.36506e-39
Putative Complete
sp_v1.1_unigene86225 SustainPine v1.1 261
AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 2.0e-23
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 6.89989e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain