Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA-directed RNA polymerase II, core complex

Term: GO:0005665  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene5450 SustainPine v1.1 2667
AutoFact: DNA-directed RNA polymerase n=3 Tax=core eudicotyledons RepID=A5C1N0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Complete
sp_v1.1_unigene5760 SustainPine v1.1 1788
AutoFact: DNA-directed RNA polymerase II 19 kDa polypeptide; K03015 DNA-directed RNA polymerase II subunit G 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: rna polymerase ii 0.0
Complete
sp_v1.1_unigene8092 SustainPine v1.1 1375
AutoFact: NRPB5; NRPB5; DNA binding / DNA-directed RNA polymerase; K03013 DNA-directed RNA polymerase II subunit E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene11735 SustainPine v1.1 682
AutoFact: DNA-directed RNA polymerase n=2 Tax=rosids RepID=B9SXC0_RICCO 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase ii largest 0.0
N-terminus
sp_v1.1_unigene15170 SustainPine v1.1 1402
AutoFact: DNA-directed RNA polymerase; K03014 DNA-directed RNA Polymerase II subunit F 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii subunit-like protein 0.0
Complete
sp_v1.1_unigene15249 SustainPine v1.1 1196
AutoFact: NRPB5; NRPB5; DNA binding / DNA-directed RNA polymerase; K03013 DNA-directed RNA polymerase II subunit E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15690 SustainPine v1.1 636
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.44756e-24
Complete
sp_v1.1_unigene16110 SustainPine v1.1 658
AutoFact: DNA-directed RNA polymerase II subunit Rpb10; K03007 DNA-directed RNA Polymerase II subunit L 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.19378e-34
Complete
sp_v1.1_unigene16413 SustainPine v1.1 799
AutoFact: DNA-directed RNA polymerase II, putative; K03013 DNA-directed RNA polymerase II subunit E 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii and iii kda subunit 8.33197e-30
Putative Complete
sp_v1.1_unigene16945 SustainPine v1.1 982
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v1.1_unigene18367 SustainPine v1.1 1673
AutoFact: DNA-directed RNA polymerase II subunit, putative; K03011 DNA-directed RNA polymerase II subunit C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v1.1_unigene18699 SustainPine v1.1 974
AutoFact: DNA-directed RNA polymerase II subunit J n=3 Tax=Andropogoneae RepID=B4FJS1_MAIZE 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene19044 SustainPine v1.1 1652
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQW1_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase; Pinus koraiensis (Korean pine). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase ii largest subunit 0.0
Putative C-terminus
sp_v1.1_unigene21038 SustainPine v1.1 723
AutoFact: pco092707; LOC100285004; K03009 DNA-directed RNA Polymerase II subunit K 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 1.63479e-23
Complete
sp_v1.1_unigene21428 SustainPine v1.1 1250
AutoFact: DNA-directed RNA polymerase; K03014 DNA-directed RNA Polymerase II subunit F 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii subunit 0.0
Complete
sp_v1.1_unigene21881 SustainPine v1.1 675
AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 2.0e-28
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 1.31686e-29
Internal
sp_v1.1_unigene22591 SustainPine v1.1 964
AutoFact: NRPB4; NRPB4; DNA-directed RNA polymerase; K03012 DNA-directed RNA polymerase II subunit D 0.0
FL-Next: tr=RPB15.9; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
Complete
sp_v1.1_unigene23553 SustainPine v1.1 1225
AutoFact: DNA-directed RNA polymerase subunit n=2 Tax=Papilionoideae RepID=C6SXF5_SOYBN 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
sp_v1.1_unigene24374 SustainPine v1.1 801
AutoFact: DNA-directed RNA polymerase subunit n=7 Tax=Embryophyta RepID=Q2QNM4_ORYSJ 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 0.0
Complete
sp_v1.1_unigene25930 SustainPine v1.1 1537
AutoFact: DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ 1.00053e-42
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase 7.28675e-44
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain