Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleoid

Term: GO:0009295  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene5124 SustainPine v1.1 1128
AutoFact: ribosomal protein L29 family protein 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l29 0.0
Complete
sp_v1.1_unigene16414 SustainPine v1.1 1071
AutoFact: Elongation factor Tu n=2 Tax=Picea sitchensis RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast elongation factor tub 0.0
C-terminus
sp_v1.1_unigene16770 SustainPine v1.1 929
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Spinacia oleracea RepID=RK12_SPIOL 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 1.28057e-38
C-terminus
sp_v1.1_unigene17404 SustainPine v1.1 566
AutoFact: ribosomal protein L29 family protein 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l29 0.0
Putative Complete
sp_v1.1_unigene18953 SustainPine v1.1 1134
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Spinacia oleracea RepID=RK12_SPIOL 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 4.34245e-37
Complete
sp_v1.1_unigene19066 SustainPine v1.1 686
AutoFact: PSI-P; PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene20454 SustainPine v1.1 1596
AutoFact: Fructokinase-like protein 1 n=1 Tax=Solanum tuberosum RepID=D9IWP2_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructokinase-like protein 1 0.0
Putative C-terminus
sp_v1.1_unigene24714 SustainPine v1.1 1015
AutoFact: thioredoxin family protein 5.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.01431e-27
Complete
sp_v1.1_unigene25186 SustainPine v1.1 566
AutoFact: thioredoxin family protein 3.0e-11
FL-Next: sp=Thioredoxin-like protein CITRX, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 2.44576e-13
Putative Complete
sp_v1.1_unigene27356 SustainPine v1.1 1928
AutoFact: Elongation factor Tu n=2 Tax=Picea sitchensis RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast elongation factor (ef- ) 0.0
Complete
sp_v1.1_unigene27947 SustainPine v1.1 744
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Spinacia oleracea RepID=RK12_SPIOL 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 9.24087e-25
C-terminus
sp_v1.1_unigene34652 SustainPine v1.1 1111
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Spinacia oleracea RepID=RK12_SPIOL 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l12 3.44578e-39
Complete
sp_v1.1_unigene36664 SustainPine v1.1 485
AutoFact: Fructokinase-like protein 1 n=1 Tax=Nicotiana benthamiana RepID=D9IWN9_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructokinase-like protein 1 0.0
C-terminus
sp_v1.1_unigene62086 SustainPine v1.1 504
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Nicotiana RepID=RK12_NICSY 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l12-a 2.36977e-18
C-terminus
sp_v1.1_unigene66519 SustainPine v1.1 310
AutoFact: rpl29, L29; ribosomal protein L29; K02904 large subunit ribosomal protein L29 6.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l29 1.31154e-21
Internal
sp_v1.1_unigene72987 SustainPine v1.1 417
AutoFact: Fructokinase-like protein 1 n=1 Tax=Nicotiana benthamiana RepID=D9IWN9_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fructokinase-like protein 1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain