Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: positive regulation of transcription, DNA-dependent

Term: GO:0045893  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene4690 SustainPine v1.1 2607
AutoFact: Paf1 complex protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S430_PHYPA 0.0
FL-Next: tr=Paf1 complex protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: paf1 complex component 0.0
Complete
sp_v1.1_unigene8504 SustainPine v1.1 2905
AutoFact: VERNALIZATION INDEPENDENCE 6 n=2 Tax=Arabidopsis thaliana RepID=B5X0I6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat nuclear 0.0
Complete
sp_v1.1_unigene8758 SustainPine v1.1 742
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene11995 SustainPine v1.1 715
AutoFact: PTAC12; PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12) 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ptac12 (plastid transcriptionally active12) 0.0
N-terminus
sp_v1.1_unigene29040 SustainPine v1.1 1025
AutoFact: PTAC6; PTAC6 (PLASTID TRANSCRIPTIONALLY ACTIVE6) 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ptac6 (plastid transcriptionally active6) 0.0
C-terminus
sp_v1.1_unigene31785 SustainPine v1.1 511
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R902_RICCO 3.0e-39
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing 1.13684e-39
Putative N-terminus
sp_v1.1_unigene32666 SustainPine v1.1 875
AutoFact: PTAC2; PTAC2 (PLASTID TRANSCRIPTIONALLY ACTIVE2) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene36640 SustainPine v1.1 272
AutoFact: PTAC6; PTAC6 (PLASTID TRANSCRIPTIONALLY ACTIVE6) 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: ptac6 (plastid transcriptionally active6) 2.92731e-29
Internal
sp_v1.1_unigene37031 SustainPine v1.1 582
AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene41238 SustainPine v1.1 413
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9R8M0_RICCO 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.08441e-27
Internal
sp_v1.1_unigene49022 SustainPine v1.1 278
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kruppel-like factor 4 2.99738e-42
Internal
sp_v1.1_unigene60597 SustainPine v1.1 622
AutoFact: PTAC12; PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12) 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.94751e-36
C-terminus
sp_v1.1_unigene76257 SustainPine v1.1 405
AutoFact: RNA polymerase-associated protein RTF1, putative n=1 Tax=Ricinus communis RepID=B9RZ59_RICCO 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: paf1 complex component 2.04904e-22
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain