Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: snf2 family dna-dependent atpase

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene989 SustainPine v1.1 1146
AutoFact: ETL1; ETL1; ATP binding / DNA binding / helicase/ nucleic acid binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Putative N-terminus
sp_v1.1_unigene4679 SustainPine v1.1 959
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S7A6_RICCO 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 4.03442e-35
Putative C-terminus
sp_v1.1_unigene9070 SustainPine v1.1 1228
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RFX2_PHYPA 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 6.54505e-31
Putative C-terminus
sp_v1.1_unigene29612 SustainPine v1.1 3555
AutoFact: helicase, putative (EC:2.7.11.1); K11654 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.1.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Complete
sp_v1.1_unigene30421 SustainPine v1.1 477
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: snf2 family dna-dependent atpase 7.38955e-25
Internal
sp_v1.1_unigene32174 SustainPine v1.1 420
AutoFact: CHR1512; SNF2 family DNA-dependent ATPase; K11643 chromodomain-helicase-DNA-binding protein 4 [EC:3.6.1.-] 6.0e-13
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 1.47444e-12
Putative N-terminus
sp_v1.1_unigene39908 SustainPine v1.1 361
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TI22_PHYPA 5.0e-34
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 9.01084e-34
Internal
sp_v1.1_unigene45620 SustainPine v1.1 587
AutoFact: chromodomain helicase DNA binding protein, putative (EC:2.7.11.1); K11643 chromodomain-helicase-DNA-binding protein 4 [EC:3.6.1.-] 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Internal
sp_v1.1_unigene45755 SustainPine v1.1 184
AutoFact: CHD3-type chromatin-remodeling factor PICKLE n=2 Tax=Arabidopsis RepID=PKL_ARATH 1.0e-24
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 2.22222e-24
Internal
sp_v1.1_unigene52811 SustainPine v1.1 237
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T5F7_PHYPA 9.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 1.6132e-19
Internal
sp_v1.1_unigene72013 SustainPine v1.1 381
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S384_PHYPA 3.0e-12
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 family dna-dependent atpase 6.06064e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain