Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: double-stranded DNA binding

Term: GO:0003690  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene4069 SustainPine v1.1 1520
AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Complete
sp_v1.1_unigene8654 SustainPine v1.1 1170
AutoFact: ku P70 DNA helicase, putative; K10884 ATP-dependent DNA helicase 2 subunit 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ku p70 dna 0.0
C-terminus
sp_v1.1_unigene9385 SustainPine v1.1 1519
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDJ8_RICCO 0.0
FL-Next: sp=Flap endonuclease GEN-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
C-terminus
sp_v1.1_unigene11283 SustainPine v1.1 496
AutoFact: ATP binding protein, putative 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 1.17408e-30
Internal
sp_v1.1_unigene12350 SustainPine v1.1 225
AutoFact: PREDICTED: epidermal growth factor receptor n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE22EB 3.0e-11
Blast2go: epidermal growth factor receptor 4.71903e-11
Putative coding
sp_v1.1_unigene14199 SustainPine v1.1 1126
AutoFact: [R] COG2118 DNA-binding protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: programmed cell death protein 5 6.16571e-44
Complete
sp_v1.1_unigene14490 SustainPine v1.1 900
AutoFact: ku P70 DNA helicase, putative; K10884 ATP-dependent DNA helicase 2 subunit 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ku p70 dna 0.0
N-terminus
sp_v1.1_unigene18057 SustainPine v1.1 1291
AutoFact: Transcription factor hy5, putative n=1 Tax=Ricinus communis RepID=B9RP68_RICCO 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Complete
sp_v1.1_unigene19217 SustainPine v1.1 1614
AutoFact: CDC27 multi-domain protein 7.0e-07
FL-Next: sp=DNA-binding protein BIN4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: bin4 (brassinosteroid-insensitive4) double-stranded dna binding 7.70714e-44
C-terminus
sp_v1.1_unigene26561 SustainPine v1.1 198
AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 7.0e-27
Blast2go: catenin beta-1 1.36791e-26
unknown
sp_v1.1_unigene28918 SustainPine v1.1 215
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S0M2_RICCO 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 2.22983e-16
Internal
sp_v1.1_unigene30267 SustainPine v1.1 396
AutoFact: AtRFC1; AtRFC1 (replication factor C 1); ATP binding / DNA binding / DNA clamp loader/ nucleoside-triphosphatase/ nucleotide binding; K10754 replication factor C subunit 1 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: aaa-type atpase family protein 0.0
Internal
sp_v1.1_unigene37510 SustainPine v1.1 551
AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 1.0e-32
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ku p80 dna 0.0
Putative C-terminus
sp_v1.1_unigene40680 SustainPine v1.1 397
AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 8.0e-31
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ku p80 dna 8.25608e-32
Internal
sp_v1.1_unigene42318 SustainPine v1.1 659
AutoFact: Contains similarity to excision repair protein ERCC5 from Homo sapiens gi|1082359 and contains XPG N-terminal PF|00752 and XPG I-region PF|00867 domains [Arabidopsis thaliana] 1.0e-27
FL-Next: sp=Flap endonuclease GEN-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 1.25564e-29
N-terminus
sp_v1.1_unigene57968 SustainPine v1.1 356
AutoFact: ku P80 DNA helicase, putative; K10885 ATP-dependent DNA helicase 2 subunit 2 6.0e-37
FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ku p80 dna 3.82901e-37
Internal
sp_v1.1_unigene71131 SustainPine v1.1 253
AutoFact: ATP-dependent DNA helicase 2 subunit KU70 n=2 Tax=Arabidopsis RepID=KU70_ARATH 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ku70-like protein 1.18028e-33
Internal
sp_v1.1_unigene78900 SustainPine v1.1 1291
AutoFact: CCR4; cinnamoyl CoA reductase (EC:1.2.1.44) 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 0.0
Complete
sp_v1.1_unigene79428 SustainPine v1.1 385
AutoFact: cncr2, ccr2; cinnamoyl CoA reductase2 8.0e-39
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl- reductase 5.79047e-40
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain