Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: double-stranded RNA binding

Term: GO:0003725  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene3784 SustainPine v1.1 1905
AutoFact: Ribonuclease III, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
C-terminus
sp_v1.1_unigene5629 SustainPine v1.1 1172
AutoFact: CAF protein n=1 Tax=Arabidopsis thaliana RepID=Q56Y50_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Complete
sp_v1.1_unigene5806 SustainPine v1.1 613
AutoFact: dicer-1, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dcl1 0.0
Internal
sp_v1.1_unigene10503 SustainPine v1.1 1176
AutoFact: double-stranded RNA binding protein, putative 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: double-stranded rna binding 0.0
N-terminus
sp_v1.1_unigene12168 SustainPine v1.1 304
AutoFact: Isoform 2 of Endoribonuclease Dicer homolog 4 n=2 Tax=Oryza sativa RepID=A7LFZ6-2 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 2.13913e-32
Internal
sp_v1.1_unigene12957 SustainPine v1.1 266
AutoFact: Ribonuclease III, putative (EC:3.1.26.3); K11592 endoribonuclease Dicer [EC:3.1.26.-] 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 3.02949e-18
N-terminus
sp_v1.1_unigene14340 SustainPine v1.1 2496
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 0.0
Putative Complete
sp_v1.1_unigene16455 SustainPine v1.1 2100
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RH31_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna binding protein 0.0
Putative Complete
sp_v1.1_unigene18011 SustainPine v1.1 720
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SIL6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Internal
sp_v1.1_unigene19738 SustainPine v1.1 263
AutoFact: DUF1605 domain containing protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.97257e-25
Internal
sp_v1.1_unigene19923 SustainPine v1.1 362
AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 5.0e-12
FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 9.35761e-12
Internal
sp_v1.1_unigene20511 SustainPine v1.1 867
AutoFact: DRB2; DRB2 (DSRNA-BINDING PROTEIN 2); double-stranded RNA binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna binding protein 0.0
N-terminus
sp_v1.1_unigene20754 SustainPine v1.1 546
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dicer-like protein 0.0
Internal
sp_v1.1_unigene26250 SustainPine v1.1 2175
AutoFact: HYL1; HYL1 (HYPONASTIC LEAVES 1); double-stranded RNA binding / miRNA binding / protein binding 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 4.2039e-45
Complete
sp_v1.1_unigene29187 SustainPine v1.1 1026
AutoFact: Endoribonuclease Dicer homolog 1 n=2 Tax=Oryza sativa RepID=DCL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Putative Complete
sp_v1.1_unigene32981 SustainPine v1.1 441
AutoFact: DCL904; dicer-like protein; K11592 endoribonuclease Dicer [EC:3.1.26.-] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii family protein 1.47388e-20
Internal
sp_v1.1_unigene38351 SustainPine v1.1 499
AutoFact: DRB2; DRB2 (DSRNA-BINDING PROTEIN 2); double-stranded RNA binding 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 2 6.06832e-19
N-terminus
sp_v1.1_unigene41760 SustainPine v1.1 507
AutoFact: Ribonuclease III, putative n=1 Tax=Ricinus communis RepID=B9SC13_RICCO 5.0e-31
FL-Next: Isoform 2 of Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica GN=DCL4 0.0
Blast2go: dicer-like protein 9.45558e-31
N-terminus
sp_v1.1_unigene41882 SustainPine v1.1 264
AutoFact: double-stranded RNA binding protein, putative 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 5 1.0497e-26
N-terminus
sp_v1.1_unigene48428 SustainPine v1.1 270
AutoFact: Endoribonuclease Dicer homolog 3a n=1 Tax=Oryza sativa Japonica Group RepID=DCL3A_ORYSJ 1.0e-28
FL-Next: sp=Endoribonuclease Dicer homolog 3a; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ribonuclease iii family protein 6.5287e-29
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain