Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: RNA splicing

Term: GO:0008380  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene49325 SustainPine v1.1 440
AutoFact: [A] COG5161 Pre-mRNA cleavage and polyadenylation specificity factor 5.0e-09
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 1 0.0
Internal
sp_v1.1_unigene55070 SustainPine v1.1 489
AutoFact: protein binding protein, putative; K12821 pre-mRNA-processing factor 40 1.0e-39
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein binding 2.10195e-43
Internal
sp_v1.1_unigene58925 SustainPine v1.1 982
AutoFact: Thioredoxin-like protein 4A n=45 Tax=Coelomata RepID=TXN4A_HUMAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-like 4a 0.0
Complete
sp_v1.1_unigene61309 SustainPine v1.1 526
AutoFact: OTP43; OTP43 (organelle transcript processing defect 43) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene61942 SustainPine v1.1 468
AutoFact: protein binding protein, putative; K12821 pre-mRNA-processing factor 40 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein binding 3.30323e-37
Internal
sp_v1.1_unigene74131 SustainPine v1.1 315
AutoFact: transducin family protein / WD-40 repeat family protein; K13111 WD40 repeat-containing protein SMU1 5.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.7187e-22
C-terminus
sp_v1.1_unigene79062 SustainPine v1.1 348
AutoFact: RSZ32; zinc knuckle (CCHC-type) family protein 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 2.49776e-34
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain