Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: primary miRNA processing

Term: GO:0031053  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene3661 SustainPine v1.1 2348
AutoFact: MIF4G_like multi-domain protein 9.80909e-45
FL-Next: sp=Nuclear cap-binding protein subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear cap-binding protein 0.0
C-terminus
sp_v1.1_unigene3987 SustainPine v1.1 2133
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: c2h2 zinc-finger protein 0.0
C-terminus
sp_v1.1_unigene14340 SustainPine v1.1 2496
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 0.0
Putative Complete
sp_v1.1_unigene18011 SustainPine v1.1 720
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SIL6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 0.0
Internal
sp_v1.1_unigene18964 SustainPine v1.1 1172
AutoFact: Nuclear cap-binding protein subunit 2 n=3 Tax=Andropogoneae RepID=B6TL33_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear cap-binding protein 0.0
Complete
sp_v1.1_unigene28427 SustainPine v1.1 552
AutoFact: SE (SERRATE); DNA binding / transcription factor [Arabidopsis thaliana] sp|Q9ZVD0.2|SRRT_ARATH RecName: Full=Serrate RNA effector molecule gb|AAK63206.1|AF311221_1 C2H2 zinc-finger protein SERRATE [Arabidopsis thaliana] gb|AAL16137.1|AF428305_1 At2g27100/ 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: c2h2 zinc-finger protein 0.0
Internal
sp_v1.1_unigene36687 SustainPine v1.1 529
AutoFact: MIF4G domain containing protein 1.0e-13
FL-Next: sp=Nuclear cap-binding protein subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: nuclear cap-binding protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain