Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleosome assembly

Term: GO:0006334  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene17027 SustainPine v1.1 709
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 2.91299e-38
Complete
sp_v1.1_unigene17284 SustainPine v1.1 553
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 2.08532e-38
Complete
sp_v1.1_unigene17654 SustainPine v1.1 933
AutoFact: Histone H2A n=5 Tax=Pinaceae RepID=A9NK06_PICSI 1.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.26875e-27
Putative Complete
sp_v1.1_unigene18562 SustainPine v1.1 1033
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 3.0e-30
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 2.6119e-30
Misassembled
sp_v1.1_unigene18567 SustainPine v1.1 1054
AutoFact: Histone H2B.6 n=62 Tax=Spermatophyta RepID=H2B6_ARATH 9.0e-38
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 1.12103e-38
Complete
sp_v1.1_unigene18585 SustainPine v1.1 695
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 3.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 5.31375e-29
N-terminus
sp_v1.1_unigene18641 SustainPine v1.1 1068
AutoFact: Histone H2A n=2 Tax=Picea sitchensis RepID=A9NQY2_PICSI 6.0e-32
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.11064e-31
Complete
sp_v1.1_unigene18679 SustainPine v1.1 943
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 2.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Complete
sp_v1.1_unigene18745 SustainPine v1.1 882
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 1.33404e-42
Complete
sp_v1.1_unigene18870 SustainPine v1.1 605
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
N-terminus
sp_v1.1_unigene18962 SustainPine v1.1 702
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 3.78915e-38
Complete
sp_v1.1_unigene18995 SustainPine v1.1 1815
AutoFact: NFA1503; nucleosome assembly protein family; K11290 template-activating factor I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Complete
sp_v1.1_unigene19396 SustainPine v1.1 1297
AutoFact: Histone H4 n=1 Tax=Zea mays RepID=B6TJ90_MAIZE 6.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 1.05565e-37
Complete
sp_v1.1_unigene19630 SustainPine v1.1 1338
AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVZ4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome assembly protein 0.0
Putative Complete
sp_v1.1_unigene19942 SustainPine v1.1 877
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 7.72115e-43
Complete
sp_v1.1_unigene31818 SustainPine v1.1 665
AutoFact: F5I14.2 protein n=1 Tax=Arabidopsis thaliana RepID=O04466_ARATH 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin assembly factor-1 1.93782e-38
Internal
sp_v1.1_unigene40715 SustainPine v1.1 526
AutoFact: Nucleosome remodeling factor n=2 Tax=Chlamydomonadales RepID=A8J5R1_CHLRE 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cg4236 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain