Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: double-strand break repair via homologous recombination

Term: GO:0000724  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene3072 SustainPine v1.1 2416
AutoFact: chromatin assembly factor I P60 subunit, putative; K10751 chromatin assembly factor 1 subunit B 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: fas2 (fasciata 2) nucleotide binding protein binding 0.0
Complete
sp_v1.1_unigene7924 SustainPine v1.1 609
AutoFact: DNA repair and recombination protein RAD54B, putative (EC:2.7.11.1); K10875 DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.1.-] 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
C-terminus
sp_v1.1_unigene8623 SustainPine v1.1 843
AutoFact: Structural maintenance of chromosomes 6 smc6, putative n=1 Tax=Ricinus communis RepID=B9R9U6_RICCO 0.0
FL-Next: tr=Structural maintenance of chromosomes 6 smc6, putative; Ricinus communis (Castor bean). 0.0
Blast2go: structural maintenance of chromosomes family protein 0.0
Internal
sp_v1.1_unigene10807 SustainPine v1.1 892
AutoFact: Putative FAS1 n=2 Tax=Oryza sativa Japonica Group RepID=Q5N8N5_ORYSJ 8.0e-21
FL-Next: tr=Putative FAS1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chromatin assembly factor subunit 6.54528e-21
C-terminus
sp_v1.1_unigene11466 SustainPine v1.1 1433
AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: excision repair cross-complementing 1 0.0
Complete
sp_v1.1_unigene14241 SustainPine v1.1 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unnamed protein product [Vitis vinifera] 1.2573e-21
Internal
sp_v1.1_unigene14264 SustainPine v1.1 893
AutoFact: Unassigned protein
FL-Next: sp=DNA repair protein XRCC2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: x-ray repair cross complementing protein 4.2039e-45
Putative C-terminus
sp_v1.1_unigene20908 SustainPine v1.1 530
AutoFact: similar to MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC); ATP binding 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes family protein 0.0
C-terminus
sp_v1.1_unigene29788 SustainPine v1.1 617
AutoFact: DNA repair and recombination protein radA, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rada -like 0.0
C-terminus
sp_v1.1_unigene30898 SustainPine v1.1 347
AutoFact: Ultraviolet hypersensitive 1 n=3 Tax=Arabidopsis thaliana RepID=A5JEM6_ARATH 1.0e-18
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: ultraviolet hypersensitive 1 2.35124e-18
Internal
sp_v1.1_unigene31818 SustainPine v1.1 665
AutoFact: F5I14.2 protein n=1 Tax=Arabidopsis thaliana RepID=O04466_ARATH 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chromatin assembly factor-1 1.93782e-38
Internal
sp_v1.1_unigene33026 SustainPine v1.1 455
AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9SXG0_RICCO 1.0e-22
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 2.63987e-22
Internal
sp_v1.1_unigene35985 SustainPine v1.1 1114
AutoFact: excision repair cross-complementing 1 ercc1, putative; K10849 DNA excision repair protein ERCC-1 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene37076 SustainPine v1.1 621
AutoFact: rad1; RAD1 DNA repair protein homolog; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] 0.0
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene40840 SustainPine v1.1 480
AutoFact: OsRad54 protein n=1 Tax=Oryza sativa Japonica Group RepID=A4PBL4_ORYSJ 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snf2 super family 0.0
Internal
sp_v1.1_unigene43936 SustainPine v1.1 514
AutoFact: UVH1; UVH1 (ULTRAVIOLET HYPERSENSITIVE 1); single-stranded DNA specific endodeoxyribonuclease; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] 0.0
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease xpf 0.0
Internal
sp_v1.1_unigene45086 SustainPine v1.1 270
AutoFact: similar to DNA Helicase; K10901 bloom syndrome protein [EC:3.6.1.-] 2.0e-23
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 4.84178e-24
Internal
sp_v1.1_unigene47099 SustainPine v1.1 354
AutoFact: similar to MIM (HYPERSENSITIVE TO MMS, IRRADIATION AND MMC); ATP binding 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes family protein 7.98398e-35
Internal
sp_v1.1_unigene47740 SustainPine v1.1 159
AutoFact: DNA repair endonuclease xp-f / mei-9 / rad1, putative; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] 2.0e-18
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair endonuclease xp-f mei-9 3.06479e-18
Internal
sp_v1.1_unigene48442 SustainPine v1.1 369
AutoFact: similar to DNA Helicase; K10901 bloom syndrome protein [EC:3.6.1.-] 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain