Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: high mobility group family

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2265 SustainPine v1.1 1254
AutoFact: transcription factor, putative 5.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Putative Complete
sp_v1.1_unigene2615 SustainPine v1.1 1695
AutoFact: transcription factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
sp_v1.1_unigene2733 SustainPine v1.1 1910
AutoFact: structure-specific recognition protein, putative (EC:1.3.1.74); K09272 structure-specific recognition protein 1 0.0
FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v1.1_unigene6093 SustainPine v1.1 1025
AutoFact: ARID domain containing protein 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 4.2039e-45
N-terminus
sp_v1.1_unigene16014 SustainPine v1.1 2084
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
sp_v1.1_unigene19988 SustainPine v1.1 587
AutoFact: transcription factor, putative 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.0775e-30
N-terminus
sp_v1.1_unigene20682 SustainPine v1.1 1705
AutoFact: structure-specific recognition protein, putative (EC:1.3.1.74); K09272 structure-specific recognition protein 1 0.0
FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v1.1_unigene21490 SustainPine v1.1 1339
AutoFact: transcription factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v1.1_unigene22852 SustainPine v1.1 696
AutoFact: structure-specific recognition protein, putative (EC:1.3.1.74); K09272 structure-specific recognition protein 1 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.51517e-31
Putative Complete
sp_v1.1_unigene23238 SustainPine v1.1 552
AutoFact: structure-specific recognition protein, putative (EC:1.3.1.74); K09272 structure-specific recognition protein 1 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.31274e-32
Putative C-terminus
sp_v1.1_unigene23658 SustainPine v1.1 1379
AutoFact: High mobility group family n=1 Tax=Populus trichocarpa RepID=A9PB77_POPTR 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
sp_v1.1_unigene30787 SustainPine v1.1 675
AutoFact: transcription factor, putative 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 7.22586e-28
N-terminus
sp_v1.1_unigene37152 SustainPine v1.1 456
AutoFact: High mobility group B protein 15 n=2 Tax=Arabidopsis RepID=HMG15_ARATH 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
sp_v1.1_unigene42323 SustainPine v1.1 621
AutoFact: ARID domain containing protein 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 2.58357e-15
Putative N-terminus
sp_v1.1_unigene64550 SustainPine v1.1 647
AutoFact: structure-specific recognition protein, putative (EC:1.3.1.74); K09272 structure-specific recognition protein 1 0.0
FL-Next: sp=FACT complex subunit SSRP1; Catharanthus roseus (Madagascar periwinkle) (Vinca rosea). 0.0
Blast2go: high mobility group family 0.0
Internal
sp_v1.1_unigene75863 SustainPine v1.1 1094
AutoFact: HMGB911; high mobility group family 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 1.74434e-27
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain