Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: regulation of circadian rhythm

Term: GO:0042752  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene2175 SustainPine v1.1 827
• AutoFact: XCT (XAP5 CIRCADIAN TIMEKEEPER) [Arabidopsis thaliana] sp|Q8H110.1|XCT_ARATH RecName: Full=Protein XAP5 CIRCADIAN TIMEKEEPER gb|AAN41312.1| putative XAP-5 protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene7308 SustainPine v1.1 1594
• AutoFact: CUL1; cullin 1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene16010 SustainPine v1.1 1448
• AutoFact: Type A response regulator RR1 n=1 Tax=Phaseolus vulgaris RepID=B0YGG5_PHAVU 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: type a response regulator 0.0
Complete
sp_v1.1_unigene25667 SustainPine v1.1 1184
• AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene28598 SustainPine v1.1 381
• AutoFact: Auxin-resistance protein 6 (Fragment) n=2 Tax=Arabidopsis thaliana RepID=A5YXU7_ARATH 4.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin-resistance protein 6 3.94185e-42
Internal
sp_v1.1_unigene30413 SustainPine v1.1 774
• AutoFact: Protein SENSITIVITY TO RED LIGHT REDUCED, putative 2.99878e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene31986 SustainPine v1.1 329
• AutoFact: Response regulator 1 n=1 Tax=Pinus pinea RepID=C0LLL0_PINPI 2.0e-30
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: type-a response regulator 4.51403e-30
Internal
sp_v1.1_unigene56234 SustainPine v1.1 462
• AutoFact: Circadian clock-associated protein 1b (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=C8KHJ2_PHYPA 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lhy protein 0.0
N-terminus
sp_v1.1_unigene59459 SustainPine v1.1 1268
• AutoFact: CUL1; cullin 1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atcul1 (arabidopsis thaliana cullin 1) protein binding 0.0
Internal
sp_v1.1_unigene62109 SustainPine v1.1 391
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.15099e-40
N-terminus
sp_v1.1_unigene72956 SustainPine v1.1 376
• AutoFact: Two-component response regulator ARR3 n=3 Tax=Arabidopsis RepID=ARR3_ARATH 2.0e-22
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: two-component sensor protein histidine protein 4.5858e-22
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain