Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: DNA metabolic process

Term: GO:0006259  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene2037 SustainPine v1.1 1417
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 6.0e-31
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: topoisomerase i 7.71062e-37
N-terminus
sp_v1.1_unigene7487 SustainPine v1.1 458
AutoFact: DNA repair protein recA homolog 1, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RECAC_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein 0.0
Internal
sp_v1.1_unigene13033 SustainPine v1.1 618
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 4.53754e-30
Putative Complete
sp_v1.1_unigene14512 SustainPine v1.1 663
AutoFact: Endonuclease-like n=3 Tax=Oryza sativa RepID=Q8GT06_ORYSJ 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: mus81 (mms and uv sensitive 81) endonuclease nucleic acid binding 5.4307e-33
Internal
sp_v1.1_unigene14566 SustainPine v1.1 641
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 4.0e-28
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 6.35853e-28
Internal
sp_v1.1_unigene14698 SustainPine v1.1 2401
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
Complete
sp_v1.1_unigene29055 SustainPine v1.1 771
AutoFact: PREDICTED: similar to replicase n=1 Tax=Vitis vinifera RepID=UPI0001985745 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein 0.0
C-terminus
sp_v1.1_unigene44153 SustainPine v1.1 264
AutoFact: RECQL2; RECQL2 (ARABIDOPSIS RECQ HELICASE L2); 3'-5' DNA helicase/ ATP-dependent helicase/ four-way junction helicase/ protein binding; K10899 ATP-dependent DNA helicase Q1 [EC:3.6.1.-] 2.0e-33
FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna family expressed 3.44915e-33
Internal
sp_v1.1_unigene59688 SustainPine v1.1 668
AutoFact: Top1; topoisomerase I; K03163 DNA topoisomerase I [EC:5.99.1.2] 3.0e-39
FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
Blast2go: topoisomerase i 2.03188e-43
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain