Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: posttranscriptional gene silencing by RNA

Term: GO:0035194  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene1817 SustainPine v1.1 670
• AutoFact: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase; K12813 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 1.0e-16
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna helicase 9.19988e-20
C-terminus
sp_v1.1_unigene5636 SustainPine v1.1 1711
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RVY3_RICCO 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 0.0
C-terminus
sp_v1.1_unigene5872 SustainPine v1.1 270
• AutoFact: cleavage and polyadenylation specificity factor, putative 5.0e-23
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 6.26966e-24
Internal
sp_v1.1_unigene8921 SustainPine v1.1 1824
• AutoFact: symplekin, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene10788 SustainPine v1.1 625
• AutoFact: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding [Arabidopsis thaliana] emb|CAB81923.1| putative protein [Arabidopsis thaliana] 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: symplekin 3.24961e-42
Internal
sp_v1.1_unigene13287 SustainPine v1.1 279
• AutoFact: ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding; K12813 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 8.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna helicase 1.62188e-40
Internal
sp_v1.1_unigene13622 SustainPine v1.1 594
• AutoFact: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding [Arabidopsis thaliana] emb|CAB81923.1| putative protein [Arabidopsis thaliana] 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene14728 SustainPine v1.1 1434
• AutoFact: cleavage and polyadenylation specificity factor, putative 0.0
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 0.0
N-terminus
sp_v1.1_unigene27165 SustainPine v1.1 1802
• AutoFact: symplekin, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene27184 SustainPine v1.1 1696
• AutoFact: Putative proline-rich protein n=3 Tax=Arabidopsis RepID=Q8VYM7_ARATH 1.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: proline-rich protein precursor 0.0
N-terminus
sp_v1.1_unigene30047 SustainPine v1.1 1285
• AutoFact: PREDICTED: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase n=1 Tax=Vitis vinifera RepID=UPI00019851EB 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead deah box helicase 0.0
Internal
sp_v1.1_unigene39278 SustainPine v1.1 510
• AutoFact: DNA-directed RNA polymerase n=3 Tax=Arabidopsis RepID=Q1L5X4_ARATH 2.0e-11
• FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase iv largest subunit 3.45716e-12
Internal
sp_v1.1_unigene42675 SustainPine v1.1 443
• AutoFact: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding [Arabidopsis thaliana] emb|CAB81923.1| putative protein [Arabidopsis thaliana] 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 9.57068e-28
Internal
sp_v1.1_unigene47419 SustainPine v1.1 196
• AutoFact: MEE29; MEE29 (maternal effect embryo arrest 29); ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding 2.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase dhx16 1.79441e-26
Internal
sp_v1.1_unigene62032 SustainPine v1.1 688
• AutoFact: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding [Arabidopsis thaliana] emb|CAB81923.1| putative protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
sp_v1.1_unigene64088 SustainPine v1.1 411
• AutoFact: cleavage and polyadenylation specificity factor, putative 1.0e-29
• FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: cleavage and polyadenylation specificity factor 1.07505e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain