Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: rna helicase

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1817 SustainPine v1.1 670
AutoFact: similar to EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase; K12813 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 1.0e-16
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna helicase 9.19988e-20
C-terminus
sp_v1.1_unigene1829 SustainPine v1.1 2218
AutoFact: Activating signal cointegrator 1 complex subunit 3, helc1, putative n=1 Tax=Ricinus communis RepID=B9RLP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Complete
sp_v1.1_unigene2208 SustainPine v1.1 3484
AutoFact: DEAD box RNA helicase (RH26) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative Complete
sp_v1.1_unigene2543 SustainPine v1.1 2037
AutoFact: DEAD-box ATP-dependent RNA helicase 5 n=2 Tax=Oryza sativa RepID=RH5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Complete
sp_v1.1_unigene4106 SustainPine v1.1 1774
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R9L5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative C-terminus
sp_v1.1_unigene4511 SustainPine v1.1 1708
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative C-terminus
sp_v1.1_unigene5503 SustainPine v1.1 2301
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
C-terminus
sp_v1.1_unigene13287 SustainPine v1.1 279
AutoFact: ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding; K12813 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 1.62188e-40
Internal
sp_v1.1_unigene27936 SustainPine v1.1 1152
AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_PHAAU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene30721 SustainPine v1.1 374
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 4.00001e-40
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna helicase 3.97689e-42
Internal
sp_v1.1_unigene32910 SustainPine v1.1 481
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9R8Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Putative N-terminus
sp_v1.1_unigene35924 SustainPine v1.1 809
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene38531 SustainPine v1.1 421
AutoFact: dead box ATP-dependent RNA helicase, putative; K12811 ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene48831 SustainPine v1.1 582
AutoFact: Activating signal cointegrator 1 complex subunit 3, helc1, putative n=1 Tax=Ricinus communis RepID=B9RLP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna helicase 0.0
Internal
sp_v1.1_unigene56249 SustainPine v1.1 238
AutoFact: ATP-dependent RNA helicase, putative (EC:3.4.22.44) 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 7.49358e-17
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain