Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: gag-pol polyprotein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene1253 SustainPine v1.1 2299
• AutoFact: rve domain containing protein 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Complete
sp_v1.1_unigene6262 SustainPine v1.1 581
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v1.1_unigene11795 SustainPine v1.1 717
• AutoFact: similar to Copia protein (Gag-int-pol protein) 3.0e-08
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 1.82025e-17
C-terminus
sp_v1.1_unigene12084 SustainPine v1.1 1106
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: gag-pol polyprotein 5.46144e-13
Putative N-terminus
sp_v1.1_unigene12096 SustainPine v1.1 548
• AutoFact: Gag-pol polyprotein n=6 Tax=Glycine max RepID=Q84VH6_SOYBN 9.0e-26
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 2.35126e-27
C-terminus
sp_v1.1_unigene13256 SustainPine v1.1 634
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 9.0e-21
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 1.63236e-20
C-terminus
sp_v1.1_unigene14566 SustainPine v1.1 641
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 4.0e-28
• FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 6.35853e-28
Internal
sp_v1.1_unigene18219 SustainPine v1.1 369
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 5.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 9.55938e-30
Internal
sp_v1.1_unigene19653 SustainPine v1.1 386
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 4.0e-23
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 6.92227e-23
C-terminus
sp_v1.1_unigene20234 SustainPine v1.1 507
• AutoFact: Putative gag-pol polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUM9_ORYSJ 3.0e-24
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
• Blast2go: gag-pol polyprotein 5.9119e-25
Internal
sp_v1.1_unigene20528 SustainPine v1.1 203
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa RepID=Q7XG23_ORYSJ 3.0e-11
• FL-Next: tr=At2g06190; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 4.82532e-11
Putative N-terminus
sp_v1.1_unigene20545 SustainPine v1.1 275
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 9.70383e-17
Internal
sp_v1.1_unigene20697 SustainPine v1.1 435
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v1.1_unigene20795 SustainPine v1.1 317
• AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH 2.0e-16
• FL-Next: tr=F5K24.1 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 3.76573e-16
Internal
sp_v1.1_unigene23040 SustainPine v1.1 356
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 2.56968e-17
C-terminus
sp_v1.1_unigene24713 SustainPine v1.1 1830
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
C-terminus
sp_v1.1_unigene25108 SustainPine v1.1 1323
• AutoFact: rve domain containing protein 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v1.1_unigene25228 SustainPine v1.1 1119
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v1.1_unigene25240 SustainPine v1.1 513
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 6.0e-20
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 9.95895e-20
N-terminus
sp_v1.1_unigene25293 SustainPine v1.1 1486
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain