Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: gag-pol polyprotein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene39668 SustainPine v1.1 574
• AutoFact: Unassigned protein
• FL-Next: tr=F5K24.1 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 2.94755e-17
Internal
sp_v1.1_unigene41216 SustainPine v1.1 411
• AutoFact: Gag-pol polyprotein n=6 Tax=Glycine max RepID=Q84VH6_SOYBN 4.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 6.94492e-23
N-terminus
sp_v1.1_unigene41811 SustainPine v1.1 548
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v1.1_unigene42431 SustainPine v1.1 436
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 1.49308e-25
Internal
sp_v1.1_unigene42594 SustainPine v1.1 652
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v1.1_unigene42916 SustainPine v1.1 461
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 2.14453e-32
Internal
sp_v1.1_unigene47320 SustainPine v1.1 247
• AutoFact: Gag-pol polyprotein n=6 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-18
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 5.13628e-18
Internal
sp_v1.1_unigene47417 SustainPine v1.1 296
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 1.0e-14
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 2.68357e-14
C-terminus
sp_v1.1_unigene48774 SustainPine v1.1 417
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-13
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 3.91247e-13
C-terminus
sp_v1.1_unigene49382 SustainPine v1.1 459
• AutoFact: Gag-pol polyprotein n=6 Tax=Glycine max RepID=Q84VH6_SOYBN 2.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 1.21492e-35
Internal
sp_v1.1_unigene50209 SustainPine v1.1 405
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 5.0e-16
• FL-Next: tr=Putative uncharacterized protein T2O9.150; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 8.76944e-16
Internal
sp_v1.1_unigene50819 SustainPine v1.1 419
• AutoFact: Gag-pol polyprotein n=1 Tax=Zea mays RepID=Q8L7J3_MAIZE 2.0e-26
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
• Blast2go: gag-pol polyprotein 3.64501e-27
Internal
sp_v1.1_unigene51300 SustainPine v1.1 400
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: gag-pol polyprotein 1.16647e-17
Putative C-terminus
sp_v1.1_unigene51406 SustainPine v1.1 431
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 1.83226e-39
Complete
sp_v1.1_unigene52040 SustainPine v1.1 231
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-19
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 3.61838e-19
C-terminus
sp_v1.1_unigene52253 SustainPine v1.1 479
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-15
• FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: gag-pol polyprotein 1.07395e-15
Internal
sp_v1.1_unigene52413 SustainPine v1.1 389
• AutoFact: Putative retrotransposon polyprotein n=1 Tax=Ipomoea batatas RepID=Q5MG92_IPOBA 2.0e-22
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
• Blast2go: gag-pol polyprotein 1.0711e-23
Internal
sp_v1.1_unigene52423 SustainPine v1.1 263
• AutoFact: Gag-pol polyprotein (Fragment) n=1 Tax=Panicum virgatum RepID=A4GMN4_9POAL 4.0e-13
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: gag-pol polyprotein 1.22295e-13
Putative C-terminus
sp_v1.1_unigene53177 SustainPine v1.1 288
• AutoFact: RVT_2 domain containing protein 1.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 2.59722e-26
Internal
sp_v1.1_unigene56453 SustainPine v1.1 253
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 4.0e-14
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 7.91241e-14
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain