Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: gag-pol polyprotein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene25294 SustainPine v1.1 1265
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v1.1_unigene25295 SustainPine v1.1 1366
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 4.00001e-40
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 1.10511e-40
N-terminus
sp_v1.1_unigene25307 SustainPine v1.1 855
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v1.1_unigene25319 SustainPine v1.1 423
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 1.0e-18
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 1.98542e-18
Internal
sp_v1.1_unigene25547 SustainPine v1.1 1429
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 4.2039e-45
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
sp_v1.1_unigene25748 SustainPine v1.1 556
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 3.0e-32
• FL-Next: tr=Copia-type polyprotein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 5.24183e-32
Putative C-terminus
sp_v1.1_unigene26083 SustainPine v1.1 785
• AutoFact: Truncated copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI1_SOYBN 6.0e-14
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris (Sugar beet). 0.0
• Blast2go: gag-pol polyprotein 5.61179e-15
C-terminus
sp_v1.1_unigene30201 SustainPine v1.1 407
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=A4K7M3_ORYSJ 3.0e-28
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: gag-pol polyprotein 2.47462e-28
C-terminus
sp_v1.1_unigene30563 SustainPine v1.1 417
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-39
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 4.13247e-39
C-terminus
sp_v1.1_unigene32003 SustainPine v1.1 320
• AutoFact: rve domain containing protein 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 4.13073e-23
Internal
sp_v1.1_unigene32564 SustainPine v1.1 640
• AutoFact: OSJNBa0024J22.19 protein n=2 Tax=Oryza sativa RepID=Q7XRN3_ORYSJ 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: gag-pol polyprotein 0.0
C-terminus
sp_v1.1_unigene33279 SustainPine v1.1 409
• AutoFact: GK15001 gene product from transcript GK15001-RA 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 6.34631e-28
Internal
sp_v1.1_unigene33371 SustainPine v1.1 681
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative C-terminus
sp_v1.1_unigene35256 SustainPine v1.1 599
• AutoFact: Unassigned protein
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 3.43259e-13
Putative C-terminus
sp_v1.1_unigene36790 SustainPine v1.1 1203
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=A4K7M3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v1.1_unigene37051 SustainPine v1.1 873
• AutoFact: rve multi-domain protein 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 3.61214e-40
C-terminus
sp_v1.1_unigene38117 SustainPine v1.1 308
• AutoFact: Gag/pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9C5V1_ARATH 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 2.02265e-14
Putative C-terminus
sp_v1.1_unigene38527 SustainPine v1.1 533
• AutoFact: Gag-pol polyprotein n=6 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v1.1_unigene38580 SustainPine v1.1 498
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 1.0e-19
• FL-Next: tr=Putative uncharacterized protein; Asparagus officinalis (Garden asparagus). 0.0
• Blast2go: gag-pol polyprotein 3.56081e-25
Internal
sp_v1.1_unigene38852 SustainPine v1.1 612
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 5.0e-21
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 8.27857e-21
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain