Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: circadian rhythm

Term: GO:0007623  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene1144 SustainPine v1.1 1343
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SEI7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene3534 SustainPine v1.1 616
• AutoFact: PREDICTED: similar to FIO1 (FIONA1) n=1 Tax=Vitis vinifera RepID=UPI0001982DB3 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: ribosomal rna large subunit methyltransferase f 2.28717e-32
Putative C-terminus
sp_v1.1_unigene3944 SustainPine v1.1 2588
• AutoFact: kinase, putative (EC:2.7.11.25) 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wnk1 (with no lysine 1) kinase protein kinase protein serine threonine kinase 0.0
C-terminus
sp_v1.1_unigene4693 SustainPine v1.1 1725
• AutoFact: NAD dependent epimerase/dehydratase, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 0.0
Complete
sp_v1.1_unigene4742 SustainPine v1.1 530
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TK47_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: potassium channel protein kat1 0.0
Internal
sp_v1.1_unigene5579 SustainPine v1.1 1263
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene6839 SustainPine v1.1 1260
• AutoFact: Superoxide dismutase [Fe], chloroplastic n=11 Tax=Brassicaceae RepID=SODF_ARATH 0.0
• FL-Next: sp=Superoxide dismutase; Pinus pinaster (Maritime pine). 0.0
• Blast2go: superoxide dismutase 0.0
Complete
sp_v1.1_unigene8347 SustainPine v1.1 2875
• AutoFact: Timing of CAB expression 1 protein n=1 Tax=Castanea sativa RepID=Q56TL2_CASSA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: timing of cab expression 1 0.0
Putative Complete
sp_v1.1_unigene9812 SustainPine v1.1 1714
• AutoFact: Pseudo response regulator n=2 Tax=Populus trichocarpa RepID=B9HM08_POPTR 0.0
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: pseudo response regulator 0.0
Putative Complete
sp_v1.1_unigene10926 SustainPine v1.1 988
• AutoFact: PREDICTED: similar to FIO1 (FIONA1) n=1 Tax=Vitis vinifera RepID=UPI0001982DB3 0.0
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene11283 SustainPine v1.1 496
• AutoFact: ATP binding protein, putative 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 1.17408e-30
Internal
sp_v1.1_unigene12090 SustainPine v1.1 637
• AutoFact: GNC; GNC (GATA, nitrate-inducible, carbon metabolism-involved); transcription factor 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal
sp_v1.1_unigene12350 SustainPine v1.1 225
• AutoFact: PREDICTED: epidermal growth factor receptor n=1 Tax=Oryctolagus cuniculus RepID=UPI0001CE22EB 3.0e-11
• Blast2go: epidermal growth factor receptor 4.71903e-11
Putative coding
sp_v1.1_unigene28918 SustainPine v1.1 215
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S0M2_RICCO 4.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 2.22983e-16
Internal
sp_v1.1_unigene35058 SustainPine v1.1 867
• AutoFact: GATA transcription factor 12 n=2 Tax=Arabidopsis thaliana RepID=GAT12_ARATH 6.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.07346e-36
Putative Complete
sp_v1.1_unigene37363 SustainPine v1.1 475
• AutoFact: Pseudo response regulator n=1 Tax=Populus trichocarpa RepID=B9N4C8_POPTR 7.0e-35
• FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
• Blast2go: timing of cab expression 1 1.35367e-34
N-terminus
sp_v1.1_unigene37972 SustainPine v1.1 267
• AutoFact: kinase, putative (EC:2.7.11.25) 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.2508e-22
Internal
sp_v1.1_unigene47474 SustainPine v1.1 429
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9RAT5_RICCO 3.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wnk1 (with no lysine 1) kinase protein kinase protein serine threonine kinase 2.03995e-14
Internal
sp_v1.1_unigene48412 SustainPine v1.1 248
• AutoFact: Serine/threonine-protein kinase SNT7, chloroplastic n=2 Tax=Arabidopsis RepID=STT7_ARATH 7.0e-21
• FL-Next: sp=Serine/threonine-protein kinase STN7, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: serine threonine-protein kinase snt7 1.34867e-20
Internal
sp_v1.1_unigene73236 SustainPine v1.1 347
• AutoFact: serine/threonine protein kinase, putative 3.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.46374e-27
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain