Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: phd finger

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1143 SustainPine v1.1 1617
AutoFact: [B] COG5034 Chromatin remodeling protein, contains PhD zinc finger 4.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phd finger 0.0
Complete
sp_v1.1_unigene17849 SustainPine v1.1 758
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein At1g05835; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phd finger 6.5131e-26
Complete
sp_v1.1_unigene26990 SustainPine v1.1 658
AutoFact: PHD finger protein-related; K11979 E3 ubiquitin-protein ligase UBR7 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: phd finger 0.0
N-terminus
sp_v1.1_unigene27646 SustainPine v1.1 2841
AutoFact: phd finger protein, putative 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phd finger 0.0
Putative C-terminus
sp_v1.1_unigene28596 SustainPine v1.1 1038
AutoFact: PHD finger protein-related 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phd finger 8.20279e-16
Internal
sp_v1.1_unigene33010 SustainPine v1.1 801
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein At1g05835; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phd finger 7.38318e-26
Complete
sp_v1.1_unigene36863 SustainPine v1.1 503
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phd finger 1.00554e-31
N-terminus
sp_v1.1_unigene60546 SustainPine v1.1 552
AutoFact: PHD finger protein-related [Arabidopsis thaliana] ref|NP_974600.1| PHD finger protein-related [Arabidopsis thaliana] ref|NP_001078436.1| PHD finger protein-related [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: phd finger 4.83793e-36
N-terminus
sp_v1.1_unigene83855 SustainPine v1.1 668
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein At1g05835; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phd finger 5.06908e-26
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain