Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: methyl-CpG binding

Term: GO:0008327  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene1126 SustainPine v1.1 857
AutoFact: zinc finger protein, putative 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene1139 SustainPine v1.1 1174
AutoFact: YDG_SRA domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene1515 SustainPine v1.1 2051
AutoFact: PREDICTED: similar to SUVH4 (SU(VAR)3-9 HOMOLOG 4) n=1 Tax=Vitis vinifera RepID=UPI00019849C9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set domain protein 0.0
Putative C-terminus
sp_v1.1_unigene5846 SustainPine v1.1 742
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SZ00_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mammalian mhc iii region protein g9a 0.0
C-terminus
sp_v1.1_unigene18675 SustainPine v1.1 1811
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
Complete
sp_v1.1_unigene24435 SustainPine v1.1 568
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3M7_RICCO 4.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 1.01038e-14
N-terminus
sp_v1.1_unigene27315 SustainPine v1.1 419
AutoFact: PREDICTED: similar to SUVH4 (SU(VAR)3-9 HOMOLOG 4) n=1 Tax=Vitis vinifera RepID=UPI00019849C9 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set domain protein 5.81277e-25
Internal
sp_v1.1_unigene42739 SustainPine v1.1 725
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9N2W3_POPTR 6.99949e-42
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mammalian mhc iii region protein g9a 8.12753e-44
Internal
sp_v1.1_unigene78906 SustainPine v1.1 611
AutoFact: Methyl binding domain protein n=1 Tax=Populus trichocarpa RepID=B9HPH2_POPTR 3.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 7.28891e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain