Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene19653 SustainPine v1.1 386
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 4.0e-23
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 6.92227e-23
C-terminus
sp_v1.1_unigene19697 SustainPine v1.1 921
AutoFact: nucleic acid binding protein, putative 2.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene19800 SustainPine v1.1 505
AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 5.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box atp-dependent rna 8.28674e-32
N-terminus
sp_v1.1_unigene20539 SustainPine v1.1 863
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9STN2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 0.0
N-terminus
sp_v1.1_unigene23527 SustainPine v1.1 2307
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative; K03253 translation initiation factor eIF-3 subunit 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene26700 SustainPine v1.1 2357
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative; K03253 translation initiation factor eIF-3 subunit 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 0.0
Complete
sp_v1.1_unigene29534 SustainPine v1.1 666
AutoFact: DNA topoisomerase n=1 Tax=Ricinus communis RepID=B9RRL8_RICCO 0.0
FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
Blast2go: dna topoisomerase family protein 0.0
Internal
sp_v1.1_unigene30968 SustainPine v1.1 443
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GQA7_POPTR 3.0e-18
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: chromatin remodeling complex subunit 1.37951e-18
Internal
sp_v1.1_unigene39801 SustainPine v1.1 668
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: uv-damaged dna-binding 0.0
Internal
sp_v1.1_unigene39855 SustainPine v1.1 325
AutoFact: Serine/threonine-protein kinase-like protein CCR2 n=2 Tax=Arabidopsis RepID=ACCR2_ARATH 4.0e-11
FL-Next: sp=Serine/threonine-protein kinase-like protein CCR2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kinase family protein 1.24337e-11
Internal
sp_v1.1_unigene40002 SustainPine v1.1 180
AutoFact: Piwi domain containing protein 8.0e-07
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: eukaryotic translation initiation factor 8.69989e-26
Internal
sp_v1.1_unigene43936 SustainPine v1.1 514
AutoFact: UVH1; UVH1 (ULTRAVIOLET HYPERSENSITIVE 1); single-stranded DNA specific endodeoxyribonuclease; K10848 DNA excision repair protein ERCC-4 [EC:3.1.-.-] 0.0
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease xpf 0.0
Internal
sp_v1.1_unigene50157 SustainPine v1.1 340
AutoFact: Helicase domain-containing protein n=4 Tax=Arabidopsis RepID=D7KD38_ARALY 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene50886 SustainPine v1.1 178
AutoFact: H/ACA ribonucleoprotein complex subunit 1-like protein 1 n=6 Tax=Andropogoneae RepID=B6TFJ5_MAIZE 6.0e-13
FL-Next: sp=Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: h aca ribonucleoprotein complex subunit 1-like protein 1 1.10666e-12
Internal
sp_v1.1_unigene53032 SustainPine v1.1 210
AutoFact: H/ACA ribonucleoprotein complex subunit 1-like protein 1 n=6 Tax=Andropogoneae RepID=B6TFJ5_MAIZE 2.0e-27
FL-Next: sp=Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.64491e-27
Internal
sp_v1.1_unigene53533 SustainPine v1.1 466
AutoFact: ATP-dependent RNA helicase, putative 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: helicase domain-containing protein 0.0
Internal
sp_v1.1_unigene54467 SustainPine v1.1 175
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 1.0e-16
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 2.1617e-16
Internal
sp_v1.1_unigene54516 SustainPine v1.1 226
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S355_RICCO 3.0e-27
FL-Next: tr=ATP-dependent RNA helicase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: helicase domain-containing protein 4.7468e-27
Internal
sp_v1.1_unigene60388 SustainPine v1.1 1220
AutoFact: dead box ATP-dependent RNA helicase, putative; K03257 translation initiation factor eIF-4A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene61123 SustainPine v1.1 339
AutoFact: aprataxin, putative; K10863 aprataxin [EC:3.-.-.-] 4.0e-35
FL-Next: sp=Transcription factor bHLH140; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: basic helix-loop-helix family protein 1.59258e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain