Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene16808 SustainPine v1.1 1237
AutoFact: Putative CCCH-type zinc finger protein (Fragment) n=1 Tax=Picea abies RepID=B2KZJ1_PICAB 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccch-type zinc finger protein 0.0
C-terminus
sp_v1.1_unigene16812 SustainPine v1.1 681
AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycine-rich rna-binding 2.44899e-23
N-terminus
sp_v1.1_unigene16901 SustainPine v1.1 1670
AutoFact: zinc finger (CCCH-type) family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccch-type zinc finger protein 0.0
N-terminus
sp_v1.1_unigene16925 SustainPine v1.1 1378
AutoFact: RNA binding protein-like protein n=1 Tax=Solanum tuberosum RepID=Q2VCH8_SOLTU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene16954 SustainPine v1.1 1365
AutoFact: arginine/serine-rich splicing factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich splicing 0.0
Complete
sp_v1.1_unigene17028 SustainPine v1.1 1591
AutoFact: arginine/serine-rich splicing factor, putative 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich splicing 7.39358e-31
Complete
sp_v1.1_unigene17091 SustainPine v1.1 953
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RQ14_RICCO 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene17110 SustainPine v1.1 2480
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene17120 SustainPine v1.1 2537
AutoFact: Lysyl-tRNA synthetase (Fragment) n=3 Tax=Vitis vinifera RepID=D7UB86_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysyl-trna synthetase 0.0
C-terminus
sp_v1.1_unigene17129 SustainPine v1.1 418
AutoFact: spliceosomal protein sap, putative; K12830 splicing factor 3B subunit 3 0.0
FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene17139 SustainPine v1.1 1472
AutoFact: arginine/serine-rich splicing factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich splicing 0.0
Complete
sp_v1.1_unigene17150 SustainPine v1.1 891
AutoFact: nuclease 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dnase 2 0.0
C-terminus
sp_v1.1_unigene17168 SustainPine v1.1 1501
AutoFact: nucleic acid binding; K12839 survival of motor neuron-related-splicing factor 30 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene17190 SustainPine v1.1 999
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: signal recognition particle subunit 0.0
Internal
sp_v1.1_unigene17305 SustainPine v1.1 1189
AutoFact: endonuclease, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene17355 SustainPine v1.1 650
AutoFact: splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein; K12822 RNA-binding protein 25 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.99884e-39
C-terminus
sp_v1.1_unigene17398 SustainPine v1.1 1783
AutoFact: nucleic acid binding protein, putative 2.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Complete
sp_v1.1_unigene17515 SustainPine v1.1 1574
AutoFact: hnrnpul1, hnrpul1, wu:fb53d10, wu:fk45c03, zgc:85971; heterogeneous nuclear ribonucleoprotein U-like 1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein u-like protein 1 0.0
N-terminus
sp_v1.1_unigene17578 SustainPine v1.1 598
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.66466e-19
N-terminus
sp_v1.1_unigene17635 SustainPine v1.1 557
AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase; K12820 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain