Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene15506 SustainPine v1.1 1312
• AutoFact: ATRBP45A (RNA-binding protein 45A); RNA binding 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene15559 SustainPine v1.1 980
• AutoFact: small nuclear ribonucleoprotein G; K11099 small nuclear ribonucleoprotein G 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein g 2.21852e-36
Complete
sp_v1.1_unigene15616 SustainPine v1.1 2171
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15658 SustainPine v1.1 1285
• AutoFact: Arginine/serine-rich-splicing factor, putative; K12897 transformer-2 protein 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15672 SustainPine v1.1 651
• AutoFact: Unassigned protein 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 3.92535e-12
C-terminus
sp_v1.1_unigene15721 SustainPine v1.1 1876
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RQ14_RICCO 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene15861 SustainPine v1.1 1041
• AutoFact: H/ACA ribonucleoprotein complex subunit, putative; K11129 H/ACA ribonucleoprotein complex subunit 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nucleolar protein family a member 2 0.0
Complete
sp_v1.1_unigene15931 SustainPine v1.1 1333
• AutoFact: [OU] COG5082 Arginine methyltransferase-interacting protein, contains RING Zn-finger 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cellular nucleic acid binding 0.0
Complete
sp_v1.1_unigene15939 SustainPine v1.1 1276
• AutoFact: Arginine/serine-rich-splicing factor, putative n=1 Tax=Ricinus communis RepID=B9SXC4_RICCO 4.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene16021 SustainPine v1.1 1116
• AutoFact: RNA binding protein, putative 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna binding 0.0
Complete
sp_v1.1_unigene16155 SustainPine v1.1 809
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.60388e-36
C-terminus
sp_v1.1_unigene16182 SustainPine v1.1 1896
• AutoFact: KH_1 domain containing protein 2.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly -binding 0.0
Putative Complete
sp_v1.1_unigene16194 SustainPine v1.1 862
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RSP3_PHYPA 4.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein e 3.17016e-41
Complete
sp_v1.1_unigene16206 SustainPine v1.1 905
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TIU4_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene16322 SustainPine v1.1 1246
• AutoFact: ATP binding / alanine-tRNA ligase/ ligase, forming aminoacyl-tRNA and related compounds / nucleic acid binding / nucleotide binding (EC:6.1.1.7) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding protein 0.0
Complete
sp_v1.1_unigene16470 SustainPine v1.1 1170
• AutoFact: Kinesin-like protein NACK1 n=1 Tax=Nicotiana tabacum RepID=Q8S950_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene16599 SustainPine v1.1 843
• AutoFact: RRM_1 domain containing protein 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna binding protein 0.0
C-terminus
sp_v1.1_unigene16629 SustainPine v1.1 1057
• AutoFact: serine/arginine rich splicing factor, putative; K12891 splicing factor, arginine/serine-rich 2 4.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine arginine rich splicing 7.81197e-30
C-terminus
sp_v1.1_unigene16718 SustainPine v1.1 1092
• AutoFact: [O] COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene16793 SustainPine v1.1 1332
• AutoFact: Nuclease PA3, putative (EC:3.1.30.1) 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bifunctional nuclease 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain