Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene14306 SustainPine v1.1 864
AutoFact: helicase-related [Arabidopsis thaliana] gb|AAG52253.1|AC011717_21 putative helicase; 55525-51977 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene14310 SustainPine v1.1 897
AutoFact: Nuclease PA3, putative n=1 Tax=Ricinus communis RepID=B9S606_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclease i 0.0
C-terminus
sp_v1.1_unigene14534 SustainPine v1.1 1880
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atrsp41 rna binding nucleic acid binding nucleotide binding 0.0
Putative Complete
sp_v1.1_unigene14566 SustainPine v1.1 641
AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 4.0e-28
FL-Next: tr=Integrase core domain containing protein; Asparagus officinalis (Garden asparagus). 0.0
Blast2go: gag-pol polyprotein 6.35853e-28
Internal
sp_v1.1_unigene14611 SustainPine v1.1 532
AutoFact: SAP domain-containing protein 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sap domain-containing protein 2.87141e-31
Putative N-terminus
sp_v1.1_unigene14698 SustainPine v1.1 2401
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
Complete
sp_v1.1_unigene14770 SustainPine v1.1 1475
AutoFact: nuclear acid binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene14849 SustainPine v1.1 1191
AutoFact: Alba domain containing protein 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene14945 SustainPine v1.1 925
AutoFact: nucleic acid binding 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene14991 SustainPine v1.1 1058
AutoFact: glycine-rich RNA-binding protein, putative 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene15026 SustainPine v1.1 1801
AutoFact: serine/arginine rich splicing factor, putative; K12891 splicing factor, arginine/serine-rich 2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15031 SustainPine v1.1 1093
AutoFact: glycine-rich RNA-binding protein, putative 5.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v1.1_unigene15046 SustainPine v1.1 1360
AutoFact: nuclear acid binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene15122 SustainPine v1.1 1542
AutoFact: dead box ATP-dependent RNA helicase, putative; K12823 ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene15161 SustainPine v1.1 1365
AutoFact: Cellular nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9R835_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellular nucleic acid binding 0.0
Complete
sp_v1.1_unigene15180 SustainPine v1.1 1840
AutoFact: nuclear acid binding protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15295 SustainPine v1.1 1491
AutoFact: Putative zinc finger protein n=1 Tax=Hyacinthus orientalis RepID=Q6EIC6_HYAOR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellular nucleic acid binding 0.0
Complete
sp_v1.1_unigene15399 SustainPine v1.1 1021
AutoFact: zinc finger (C2H2 type) family protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15405 SustainPine v1.1 893
AutoFact: ccr4-associated factor, putative (EC:3.1.13.4) 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
N-terminus
sp_v1.1_unigene15495 SustainPine v1.1 1573
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S290_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain