Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene13162 SustainPine v1.1 794
AutoFact: DEAD/DEAH box helicase, putative; K12835 ATP-dependent RNA helicase DDX42 [EC:3.6.4.13] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-processing atp-dependent rna helicase prp-5 0.0
N-terminus
sp_v1.1_unigene13209 SustainPine v1.1 1056
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene13213 SustainPine v1.1 415
AutoFact: Helicase, putative n=1 Tax=Ricinus communis RepID=B9SZG8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hua enhancer 2 0.0
Internal
sp_v1.1_unigene13221 SustainPine v1.1 1244
AutoFact: PREDICTED: similar to ATP-dependent helicase n=1 Tax=Vitis vinifera RepID=UPI00019836E3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene13229 SustainPine v1.1 1047
AutoFact: RING finger protein 113A, putative; K13127 RING finger protein 113A 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 15; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene13256 SustainPine v1.1 634
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 9.0e-21
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 1.63236e-20
C-terminus
sp_v1.1_unigene13287 SustainPine v1.1 279
AutoFact: ESP3; ESP3 (ENHANCED SILENCING PHENOTYPE 3); ATP binding / ATP-dependent RNA helicase/ ATP-dependent helicase/ helicase/ nucleic acid binding; K12813 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] 8.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 1.62188e-40
Internal
sp_v1.1_unigene13296 SustainPine v1.1 1293
AutoFact: SAP domain-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene13446 SustainPine v1.1 984
AutoFact: spliceosomal protein sap, putative; K12830 splicing factor 3B subunit 3 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene13652 SustainPine v1.1 2484
AutoFact: nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v1.1_unigene13712 SustainPine v1.1 816
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SS37_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box protein abstrakt 0.0
Internal
sp_v1.1_unigene13735 SustainPine v1.1 677
AutoFact: cleavage and polyadenylation specificity factor (CPSF) A subunit C-terminal domain-containing protein 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene13884 SustainPine v1.1 1663
AutoFact: dead box ATP-dependent RNA helicase, putative 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 57; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: atp-dependent rna helicase 0.0
Complete
sp_v1.1_unigene13967 SustainPine v1.1 800
AutoFact: hydroxyproline-rich glycoprotein family protein 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene13985 SustainPine v1.1 740
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
Internal
sp_v1.1_unigene14071 SustainPine v1.1 624
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H n=1 Tax=Medicago truncatula RepID=A2Q2J0_MEDTR 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) ribonuclease h 5.40413e-21
Internal
sp_v1.1_unigene14117 SustainPine v1.1 1362
AutoFact: SWIB complex BAF60b domain-containing protein / plus-3 domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] 3.0e-33
FL-Next: sp=Uncharacterized protein At5g08430; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: plus-3 domain containing expressed 0.0
Internal
sp_v1.1_unigene14185 SustainPine v1.1 281
AutoFact: elongation factor ts, putative 7.0e-19
FL-Next: sp=Elongation factor Ts; Vitis vinifera (Grape). 0.0
Blast2go: protein 2.71882e-21
Internal
sp_v1.1_unigene14299 SustainPine v1.1 412
AutoFact: Oligoribonuclease, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KPH7_CRYNE 9.99967e-42
FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: oligoribonuclease 1.92763e-41
Internal
sp_v1.1_unigene14304 SustainPine v1.1 1935
AutoFact: Putative pre-mRNA splicing factor SF2 n=1 Tax=Oryza sativa Japonica Group RepID=Q7XI72_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor sf2 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain