Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene11360 SustainPine v1.1 601
AutoFact: nbp1, NBP; nucleic acid binding protein1 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid-binding protein 6.82567e-39
C-terminus
sp_v1.1_unigene11491 SustainPine v1.1 1012
AutoFact: Argonaute/Zwille-like protein n=1 Tax=Picea glauca RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
N-terminus
sp_v1.1_unigene11610 SustainPine v1.1 3666
AutoFact: DEAD-box ATP-dependent RNA helicase 52B n=3 Tax=Oryza sativa RepID=RH52B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene11720 SustainPine v1.1 1742
AutoFact: U4/U6 small nuclear ribonucleoprotein Prp4, putative (EC:2.3.1.48); K12662 U4/U6 small nuclear ribonucleoprotein PRP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene11781 SustainPine v1.1 2214
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SGS6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene11850 SustainPine v1.1 1032
AutoFact: RNase H domain-containing protein n=2 Tax=Arabidopsis RepID=D7KNL9_ARALY 3.00004e-41
FL-Next: sp=DCC family protein At1g52590, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rnase h domain-containing protein 5.59384e-41
Complete
sp_v1.1_unigene11872 SustainPine v1.1 1228
AutoFact: Rnase h, putative n=1 Tax=Ricinus communis RepID=B9S2M9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exonuclease family protein 0.0
C-terminus
sp_v1.1_unigene12067 SustainPine v1.1 378
AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding 0.0
Internal
sp_v1.1_unigene12096 SustainPine v1.1 548
AutoFact: Gag-pol polyprotein n=6 Tax=Glycine max RepID=Q84VH6_SOYBN 9.0e-26
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 2.35126e-27
C-terminus
sp_v1.1_unigene12120 SustainPine v1.1 527
AutoFact: CPSF160; nucleic acid binding 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene12247 SustainPine v1.1 788
AutoFact: PHD finger protein-related 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phd-finger family expressed 1.56595e-41
Internal
sp_v1.1_unigene12363 SustainPine v1.1 323
AutoFact: Lysyl-tRNA synthetase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D1I7_LACBS 2.0e-24
FL-Next: sp=Lysyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: lysyl-trna synthetase 2.83772e-24
C-terminus
sp_v1.1_unigene12778 SustainPine v1.1 1934
AutoFact: polypyrimidine tract binding protein, putative (EC:1.3.1.74) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene12851 SustainPine v1.1 457
AutoFact: similar to gag-pol polyprotein 4.0e-25
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: gag pol polyprotein 3.27928e-26
Putative N-terminus
sp_v1.1_unigene12865 SustainPine v1.1 367
AutoFact: emb1441 (embryo defective 1441); nucleic acid binding / zinc ion binding 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: emb1441 (embryo defective 1441) nucleic acid binding zinc ion binding 6.61715e-18
C-terminus
sp_v1.1_unigene12949 SustainPine v1.1 226
AutoFact: dead box ATP-dependent RNA helicase, putative 3.0e-23
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 47B; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: atp-dependent rna helicase 9.79424e-25
Internal
sp_v1.1_unigene12976 SustainPine v1.1 777
AutoFact: [R] COG1204 Superfamily II helicase 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene13009 SustainPine v1.1 348
AutoFact: RVT_2 domain containing protein 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon protein 1.46152e-12
Internal
sp_v1.1_unigene13033 SustainPine v1.1 618
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 4.53754e-30
Putative Complete
sp_v1.1_unigene13093 SustainPine v1.1 866
AutoFact: Putative RNA helicase A (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9ZU53_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: deah (asp-glu-ala-his) box polypeptide 36 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain