Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: CUL4 RING ubiquitin ligase complex

Term: GO:0080008  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene976 SustainPine v1.1 1365
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: uv-damaged dna-binding 0.0
C-terminus
sp_v1.1_unigene1385 SustainPine v1.1 958
AutoFact: putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM14874.1| putative WD-40 repeat protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 0.0
Putative N-terminus
sp_v1.1_unigene7039 SustainPine v1.1 2023
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene8793 SustainPine v1.1 1968
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
Complete
sp_v1.1_unigene10138 SustainPine v1.1 2128
AutoFact: WD-40 repeat-containing protein MSI1 n=13 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
Complete
sp_v1.1_unigene10188 SustainPine v1.1 1943
AutoFact: U3 small nucleolar RNA (U3 snorna) associated protein, putative; K11806 WD repeat and SOF domain-containing protein 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene10297 SustainPine v1.1 748
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pak1 interacting protein 1 1.31443e-38
Putative C-terminus
sp_v1.1_unigene10328 SustainPine v1.1 618
AutoFact: transducin family protein / WD-40 repeat family protein; K13175 THO complex subunit 6 4.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 3.94777e-32
C-terminus
sp_v1.1_unigene10448 SustainPine v1.1 1323
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat protein 0.0
C-terminus
sp_v1.1_unigene11002 SustainPine v1.1 739
AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set1 complex component swd2 0.0
C-terminus
sp_v1.1_unigene11255 SustainPine v1.1 811
AutoFact: katanin P80 subunit, putative (EC:2.3.1.48) 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p80 1.88529e-25
C-terminus
sp_v1.1_unigene11617 SustainPine v1.1 905
AutoFact: LEC14B protein, putative; K11801 WD repeat-containing protein 23 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene11720 SustainPine v1.1 1742
AutoFact: U4/U6 small nuclear ribonucleoprotein Prp4, putative (EC:2.3.1.48); K12662 U4/U6 small nuclear ribonucleoprotein PRP4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v1.1_unigene11743 SustainPine v1.1 1710
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-repeat membrane protein 0.0
Putative C-terminus
sp_v1.1_unigene11844 SustainPine v1.1 1170
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0
FL-Next: sp=Regulatory-associated protein of TOR 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
sp_v1.1_unigene12067 SustainPine v1.1 378
AutoFact: DNA damage-binding protein, putative; K10140 DNA damage-binding protein 2 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding 0.0
Internal
sp_v1.1_unigene12299 SustainPine v1.1 269
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase protein 1.76164e-34
C-terminus
sp_v1.1_unigene12541 SustainPine v1.1 959
AutoFact: EDA7; EDA7 (embryo sac development arrest 7) 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene12846 SustainPine v1.1 983
AutoFact: T16O11.22 protein n=1 Tax=Arabidopsis thaliana RepID=Q9SR85_ARATH 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene13023 SustainPine v1.1 998
AutoFact: WD-repeat protein, putative (EC:2.3.1.48) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain