Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: CUL4 RING ubiquitin ligase complex

Term: GO:0080008  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene14067 SustainPine v1.1 199
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=U3 small nucleolar RNA-associated protein 18 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleotide binding 1.96124e-17
Internal
sp_v1.1_unigene14100 SustainPine v1.1 409
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9RE28_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: f-box and wd40 domain 2.89241e-37
Internal
sp_v1.1_unigene14852 SustainPine v1.1 1905
AutoFact: FVE n=1 Tax=Pisum sativum RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Complete
sp_v1.1_unigene15390 SustainPine v1.1 1601
AutoFact: VIP3; VIP3 (vernalization independence 3); nucleotide binding / protein binding; K12602 WD repeat-containing protein 61 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vernalization independence 0.0
Complete
sp_v1.1_unigene15638 SustainPine v1.1 1565
AutoFact: mitotic checkpoint protein bub3, putative; K02180 cell cycle arrest protein BUB3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
Complete
sp_v1.1_unigene15896 SustainPine v1.1 2222
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene15908 SustainPine v1.1 2103
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine kinase receptor-associated 0.0
Complete
sp_v1.1_unigene16456 SustainPine v1.1 744
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T4F8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40-repeat protein 0.0
Putative C-terminus
sp_v1.1_unigene16565 SustainPine v1.1 1196
AutoFact: EMB2271 (EMBRYO DEFECTIVE 2271); nucleotide binding 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene16822 SustainPine v1.1 2326
AutoFact: AY106137; LOC100282926; K12862 pleiotropic regulator 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: prl1 protein 0.0
Complete
sp_v1.1_unigene17416 SustainPine v1.1 3461
AutoFact: CUL4; cullin 4; K10609 cullin 4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein cullin 4 0.0
Complete
sp_v1.1_unigene17419 SustainPine v1.1 800
AutoFact: [R] COG2319 FOG: WD40 repeat 6.0e-24
FL-Next: sp=U3 small nucleolar RNA-associated protein 18 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleotide binding 0.0
C-terminus
sp_v1.1_unigene17506 SustainPine v1.1 912
AutoFact: coatomer alpha subunit, putative (EC:2.7.11.7); K05236 coatomer protein complex, subunit alpha (xenin) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer alpha 0.0
Putative Complete
sp_v1.1_unigene17581 SustainPine v1.1 1667
AutoFact: transducin family protein / WD-40 repeat family protein; K12880 THO complex subunit 3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v1.1_unigene17693 SustainPine v1.1 609
AutoFact: transducin family protein / WD-40 repeat family protein 1.0e-13
FL-Next: sp=WD repeat-containing protein DWA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin family protein 7.19742e-15
C-terminus
sp_v1.1_unigene17935 SustainPine v1.1 451
AutoFact: WD-repeat protein, putative (EC:2.7.11.7); K13111 WD40 repeat-containing protein SMU1 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
N-terminus
sp_v1.1_unigene19064 SustainPine v1.1 613
AutoFact: Alpha-COP n=1 Tax=Chlamydomonas reinhardtii RepID=A8HRR9_CHLRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
sp_v1.1_unigene19462 SustainPine v1.1 713
AutoFact: WD-repeat protein, putative 1.00053e-42
FL-Next: sp=Ribosome biogenesis protein WDR12 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: protein 5.60519e-45
N-terminus
sp_v1.1_unigene19761 SustainPine v1.1 1033
AutoFact: DNA repair protein xp-E, putative; K10610 DNA damage-binding protein 1 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: uv-damaged dna-binding 0.0
Internal
sp_v1.1_unigene19971 SustainPine v1.1 791
AutoFact: plant poly(A)+ RNA export protein, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain