Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: SCF ubiquitin ligase complex

Term: GO:0019005  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene874 SustainPine v1.1 2584
AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
Blast2go: transport inhibitor response 1 0.0
Complete
sp_v1.1_unigene2274 SustainPine v1.1 2005
AutoFact: FBL2; F-box protein FBL2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein fbl2 0.0
Complete
sp_v1.1_unigene5005 SustainPine v1.1 2442
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Putative Complete
sp_v1.1_unigene6341 SustainPine v1.1 776
AutoFact: RBX1-like protein n=5 Tax=Spermatophyta RepID=A0ELV2_PETIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 0.0
Complete
sp_v1.1_unigene7767 SustainPine v1.1 1429
AutoFact: cullin, putative; K03869 cullin 3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene7833 SustainPine v1.1 1589
AutoFact: F-box/LRR-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9STU0_RICCO 0.0
FL-Next: sp=F-box protein SKIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v1.1_unigene9610 SustainPine v1.1 2378
AutoFact: Cullin, putative n=1 Tax=Ricinus communis RepID=B9S8U7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v1.1_unigene17994 SustainPine v1.1 787
AutoFact: CUL3B; CUL3B (CULLIN 3B); protein binding / ubiquitin-protein ligase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v1.1_unigene19270 SustainPine v1.1 1956
AutoFact: similar to F-box-containing protein 2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-containing protein 2 0.0
Complete
sp_v1.1_unigene19428 SustainPine v1.1 632
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 4.0e-18
FL-Next: sp=F-box protein SNE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 5.74799e-18
Complete
sp_v1.1_unigene21149 SustainPine v1.1 1384
AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coronitine insensitive 1 0.0
C-terminus
sp_v1.1_unigene25789 SustainPine v1.1 640
AutoFact: [O] COG5647 Cullin, a subunit of E3 ubiquitin ligase 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cullin 3b 1.57215e-26
C-terminus
sp_v1.1_unigene25825 SustainPine v1.1 833
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein 0.0
Complete
sp_v1.1_unigene26320 SustainPine v1.1 1874
AutoFact: TIR1/AFB auxin receptor protein PintaAFB6 n=1 Tax=Pinus taeda RepID=C9EHT0_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB6; Pinus taeda (Loblolly pine). 0.0
Blast2go: transport inhibitor response 1 0.0
N-terminus
sp_v1.1_unigene26797 SustainPine v1.1 636
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein gid2 1.3182e-25
Putative Complete
sp_v1.1_unigene29847 SustainPine v1.1 547
AutoFact: TRANSPORT INHIBITOR RESPONSE 1 protein, putative; K10268 F-box and leucine-rich repeat protein 2/20 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Internal
sp_v1.1_unigene32532 SustainPine v1.1 478
AutoFact: CUL3B; CUL3B (CULLIN 3B); protein binding / ubiquitin-protein ligase 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v1.1_unigene35190 SustainPine v1.1 945
AutoFact: RBX1-like protein n=5 Tax=Spermatophyta RepID=A0ELV2_PETIN 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box protein 0.0
Complete
sp_v1.1_unigene39929 SustainPine v1.1 307
AutoFact: cullin, putative; K03869 cullin 3 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cullin 3 1.25811e-40
Internal
sp_v1.1_unigene59123 SustainPine v1.1 758
AutoFact: RBX1-like protein n=5 Tax=Spermatophyta RepID=A0ELV2_PETIN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring-box roc1 rbx1 hrt1 protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain