Sustainpine_db
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Assembly Name: SustainPine v1.1

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v1.1_unigene59547 SustainPine v1.1 1122
AutoFact: 60S ribosomal protein L6 n=3 Tax=Picea sitchensis RepID=A9NLS7_PICSI 0.0
FL-Next: sp=60S ribosomal protein L6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l6 0.0
Complete
sp_v1.1_unigene59593 SustainPine v1.1 1296
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
FL-Next: sp=Polyubiquitin 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene60464 SustainPine v1.1 588
AutoFact: Polyubiquitin n=1 Tax=Volvox carteri f. nagariensis RepID=D8U995_VOLCA 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 2 1.07765e-33
Complete
sp_v1.1_unigene61005 SustainPine v1.1 775
AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.54143e-44
N-terminus
sp_v1.1_unigene62343 SustainPine v1.1 444
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 4.2039e-45
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitin 8.40779e-45
Putative Complete
sp_v1.1_unigene62695 SustainPine v1.1 286
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 7.0e-33
FL-Next: sp=Ubiquitin; Avena sativa (Oat). 0.0
Blast2go: polyubiquitin 1.30178e-32
Complete
sp_v1.1_unigene63851 SustainPine v1.1 415
AutoFact: 60S ribosomal protein L27 n=2 Tax=Picea sitchensis RepID=A9NQ84_PICSI 8.0e-26
FL-Next: sp=60S ribosomal protein L27; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l27 5.14634e-26
C-terminus
sp_v1.1_unigene64193 SustainPine v1.1 290
AutoFact: similar to polyubiquitin; K08770 ubiquitin C 4.0e-30
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: polyubiquitin 9.62955e-30
Internal
sp_v1.1_unigene64776 SustainPine v1.1 531
AutoFact: Ubiquitin-like protein n=1 Tax=Phaseolus vulgaris RepID=P93501_PHAVU 5.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Blast2go: polyubiquitin 2.30477e-36
Complete
sp_v1.1_unigene66170 SustainPine v1.1 417
AutoFact: 60S ribosomal protein L11-1 n=56 Tax=Embryophyta RepID=RL111_ARATH 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 7.90745e-22
C-terminus
sp_v1.1_unigene66217 SustainPine v1.1 405
AutoFact: 60S ribosomal protein L23 n=39 Tax=Embryophyta RepID=RL23_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23 0.0
N-terminus
sp_v1.1_unigene69427 SustainPine v1.1 470
AutoFact: polyubiquitin containing 7 ubiquitin monomers 7.0e-36
FL-Next: sp=Ubiquitin; Lupinus polyphyllus (Large-leaved lupin). 0.0
Blast2go: polyubiquitin 7.29226e-36
Complete
sp_v1.1_unigene75801 SustainPine v1.1 746
AutoFact: 60S ribosomal protein L3-like 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein 0.0
N-terminus
sp_v1.1_unigene76199 SustainPine v1.1 550
AutoFact: Polyubiquitin n=1 Tax=Volvox carteri f. nagariensis RepID=D8U995_VOLCA 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 2 4.27018e-41
Putative Complete
sp_v1.1_unigene77114 SustainPine v1.1 345
AutoFact: 60S ribosomal protein L23 n=39 Tax=Embryophyta RepID=RL23_ARATH 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23 1.10938e-31
C-terminus
sp_v1.1_unigene77401 SustainPine v1.1 611
AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein 1.31914e-40
C-terminus
sp_v1.1_unigene78758 SustainPine v1.1 441
AutoFact: 60S ribosomal protein L35 n=4 Tax=Spermatophyta RepID=B3TLM6_ELAGV 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l35 2.09321e-23
Putative Complete
sp_v1.1_unigene79887 SustainPine v1.1 567
AutoFact: Ribosomal protein L25-like protein n=2 Tax=core eudicotyledons RepID=Q3HRX7_SOLTU 7.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l23a 3.26754e-29
Putative N-terminus
sp_v1.1_unigene79983 SustainPine v1.1 911
AutoFact: Polyubiquitin 4 UBQ4 n=1 Tax=Arabidopsis thaliana RepID=Q0WRN6_ARATH 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene80148 SustainPine v1.1 402
AutoFact: RPL3B; RPL3B (R-PROTEIN L3 B); structural constituent of ribosome; K02925 large subunit ribosomal protein L3e 9.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l3 3.62322e-35
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain