Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v1.1

Name: cytosolic large ribosomal subunit

Term: GO:0022625  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v1.1_unigene25323 SustainPine v1.1 1311
• AutoFact: UBQ4; UBQ4; protein binding; K08770 ubiquitin C 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene25331 SustainPine v1.1 1538
• AutoFact: Ubiquitin n=49 Tax=Eukaryota RepID=UBQ10_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene25355 SustainPine v1.1 554
• AutoFact: Ubiquitin-like protein n=1 Tax=Phaseolus vulgaris RepID=P93501_PHAVU 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene25476 SustainPine v1.1 640
• AutoFact: 60S ribosomal protein L27a, putative; K02900 large subunit ribosomal protein L27Ae 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene25622 SustainPine v1.1 493
• AutoFact: 60S ribosomal protein L27a, putative; K02900 large subunit ribosomal protein L27Ae 5.60519e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene25777 SustainPine v1.1 1364
• AutoFact: 60S ribosomal protein L24, putative; K02896 large subunit ribosomal protein L24e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v1.1_unigene26568 SustainPine v1.1 1484
• AutoFact: Ubiquitin n=49 Tax=Eukaryota RepID=UBQ10_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene26617 SustainPine v1.1 697
• AutoFact: Ubiquitin-like protein n=1 Tax=Phaseolus vulgaris RepID=P93501_PHAVU 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene26690 SustainPine v1.1 466
• AutoFact: 60S ribosomal protein L35a-1 n=11 Tax=rosids RepID=R35A1_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l35a 0.0
Putative Complete
sp_v1.1_unigene27128 SustainPine v1.1 901
• AutoFact: Ubiquitin-like protein n=1 Tax=Phaseolus vulgaris RepID=P93501_PHAVU 5.60519e-45
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 2.8026e-45
Putative Complete
sp_v1.1_unigene27345 SustainPine v1.1 563
• AutoFact: 60S ribosomal protein L23 n=39 Tax=Embryophyta RepID=RL23_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l23 0.0
Putative Complete
sp_v1.1_unigene27418 SustainPine v1.1 1333
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_36.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CU96_VITVI 0.0
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Blast2go: ubiquitin 0.0
Putative Complete
sp_v1.1_unigene28282 SustainPine v1.1 1598
• AutoFact: Ubiquitin n=49 Tax=Eukaryota RepID=UBQ10_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin 0.0
Complete
sp_v1.1_unigene28350 SustainPine v1.1 1101
• AutoFact: 60S ribosomal protein L21 n=3 Tax=BEP clade RepID=Q9AV87_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l21 0.0
Complete
sp_v1.1_unigene28646 SustainPine v1.1 1156
• AutoFact: 60S ribosomal protein L32, putative; K02912 large subunit ribosomal protein L32e 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein 0.0
Complete
sp_v1.1_unigene28855 SustainPine v1.1 713
• AutoFact: 60S ribosomal protein L32, putative; K02912 large subunit ribosomal protein L32e 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l32 1.1255e-37
Putative Complete
sp_v1.1_unigene28885 SustainPine v1.1 831
• AutoFact: 60S ribosomal protein L23 n=39 Tax=Embryophyta RepID=RL23_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l23 0.0
C-terminus
sp_v1.1_unigene32783 SustainPine v1.1 1512
• AutoFact: similar to polyubiquitin; K08770 ubiquitin C 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
sp_v1.1_unigene45063 SustainPine v1.1 479
• AutoFact: Ribosomal protein L19 n=1 Tax=Postia placenta Mad-698-R RepID=B8P2X9_POSPM 0.0
• FL-Next: sp=Ribosomal protein L19; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l19 0.0
Putative N-terminus
sp_v1.1_unigene55570 SustainPine v1.1 387
• AutoFact: ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA); K02977 small subunit ribosomal protein S27Ae 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: an1-type zinc finger protein 1.95201e-25
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain